Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21370 and AZOBR_RS21375 are separated by 117 nucleotides AZOBR_RS21375 and AZOBR_RS21380 are separated by 102 nucleotides AZOBR_RS21380 and AZOBR_RS21385 are separated by 455 nucleotides
AZOBR_RS21370: AZOBR_RS21370 - conserved membrane protein of unknown function, at 1,576,209 to 1,577,108
_RS21370
AZOBR_RS21375: AZOBR_RS21375 - acyl carrier protein, at 1,577,226 to 1,577,564
_RS21375
AZOBR_RS21380: AZOBR_RS21380 - hypothetical protein, at 1,577,667 to 1,578,095
_RS21380
AZOBR_RS21385: AZOBR_RS21385 - 16S ribosomal RNA, at 1,578,551 to 1,580,045
_RS21385
Position (kb)
1577
1578
1579 Strain fitness (log2 ratio)
-2
-1
0
1 at 1576.856 kb on - strand, within AZOBR_RS21370 at 1577.032 kb on - strand at 1577.095 kb on + strand at 1577.095 kb on + strand at 1577.120 kb on + strand at 1577.120 kb on + strand at 1577.120 kb on + strand at 1577.120 kb on + strand at 1577.121 kb on - strand at 1577.121 kb on - strand at 1577.121 kb on - strand at 1577.209 kb on + strand at 1577.226 kb on - strand at 1577.832 kb on + strand, within AZOBR_RS21380 at 1577.832 kb on + strand, within AZOBR_RS21380 at 1577.833 kb on - strand, within AZOBR_RS21380 at 1577.833 kb on - strand, within AZOBR_RS21380 at 1577.833 kb on - strand, within AZOBR_RS21380 at 1577.988 kb on + strand, within AZOBR_RS21380 at 1577.989 kb on - strand, within AZOBR_RS21380 at 1578.094 kb on - strand at 1578.201 kb on + strand at 1578.201 kb on + strand at 1578.202 kb on - strand at 1578.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,576,856 - AZOBR_RS21370 0.72 +1.3 1,577,032 - +0.6 1,577,095 + -1.9 1,577,095 + +1.0 1,577,120 + -0.7 1,577,120 + +0.3 1,577,120 + -0.3 1,577,120 + -0.1 1,577,121 - -2.0 1,577,121 - +1.1 1,577,121 - +1.5 1,577,209 + -1.4 1,577,226 - +0.9 1,577,832 + AZOBR_RS21380 0.38 +0.5 1,577,832 + AZOBR_RS21380 0.38 +0.2 1,577,833 - AZOBR_RS21380 0.39 -0.4 1,577,833 - AZOBR_RS21380 0.39 +0.7 1,577,833 - AZOBR_RS21380 0.39 +1.0 1,577,988 + AZOBR_RS21380 0.75 +0.3 1,577,989 - AZOBR_RS21380 0.75 -0.5 1,578,094 - -0.0 1,578,201 + -0.2 1,578,201 + -1.8 1,578,202 - -0.6 1,578,202 - +0.2
Or see this region's nucleotide sequence