Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19090 and AZOBR_RS19095 overlap by 4 nucleotides AZOBR_RS19095 and AZOBR_RS19100 overlap by 11 nucleotides AZOBR_RS19100 and AZOBR_RS19105 are separated by 18 nucleotides
AZOBR_RS19090: AZOBR_RS19090 - iron ABC transporter ATP-binding protein, at 1,052,540 to 1,053,298
_RS19090
AZOBR_RS19095: AZOBR_RS19095 - enterobactin ABC transporter permease, at 1,053,295 to 1,054,278
_RS19095
AZOBR_RS19100: AZOBR_RS19100 - iron ABC transporter permease, at 1,054,268 to 1,055,239
_RS19100
AZOBR_RS19105: AZOBR_RS19105 - iron ABC transporter substrate-binding protein, at 1,055,258 to 1,056,187
_RS19105
Position (kb)
1054
1055
1056 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1053.268 kb on - strand at 1053.485 kb on + strand, within AZOBR_RS19095 at 1053.486 kb on - strand, within AZOBR_RS19095 at 1053.486 kb on - strand, within AZOBR_RS19095 at 1053.905 kb on + strand, within AZOBR_RS19095 at 1054.302 kb on + strand at 1054.302 kb on + strand at 1054.302 kb on + strand at 1054.303 kb on - strand at 1055.334 kb on + strand at 1055.334 kb on + strand at 1055.334 kb on + strand at 1055.335 kb on - strand at 1055.602 kb on - strand, within AZOBR_RS19105 at 1055.895 kb on + strand, within AZOBR_RS19105 at 1055.928 kb on + strand, within AZOBR_RS19105 at 1055.929 kb on - strand, within AZOBR_RS19105 at 1055.929 kb on - strand, within AZOBR_RS19105 at 1055.943 kb on + strand, within AZOBR_RS19105 at 1055.943 kb on + strand, within AZOBR_RS19105 at 1055.943 kb on + strand, within AZOBR_RS19105 at 1055.944 kb on - strand, within AZOBR_RS19105 at 1055.944 kb on - strand, within AZOBR_RS19105 at 1055.944 kb on - strand, within AZOBR_RS19105 at 1055.944 kb on - strand, within AZOBR_RS19105 at 1056.108 kb on + strand at 1056.108 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,053,268 - -0.1 1,053,485 + AZOBR_RS19095 0.19 -1.1 1,053,486 - AZOBR_RS19095 0.19 -0.1 1,053,486 - AZOBR_RS19095 0.19 +1.3 1,053,905 + AZOBR_RS19095 0.62 -0.0 1,054,302 + +0.2 1,054,302 + +0.7 1,054,302 + +0.2 1,054,303 - -0.1 1,055,334 + -0.2 1,055,334 + -4.0 1,055,334 + +1.9 1,055,335 - -1.3 1,055,602 - AZOBR_RS19105 0.37 +1.5 1,055,895 + AZOBR_RS19105 0.68 -0.1 1,055,928 + AZOBR_RS19105 0.72 -0.3 1,055,929 - AZOBR_RS19105 0.72 -2.0 1,055,929 - AZOBR_RS19105 0.72 -0.5 1,055,943 + AZOBR_RS19105 0.74 -3.3 1,055,943 + AZOBR_RS19105 0.74 +0.2 1,055,943 + AZOBR_RS19105 0.74 +0.9 1,055,944 - AZOBR_RS19105 0.74 +0.1 1,055,944 - AZOBR_RS19105 0.74 -0.7 1,055,944 - AZOBR_RS19105 0.74 -0.3 1,055,944 - AZOBR_RS19105 0.74 +1.4 1,056,108 + +1.0 1,056,108 + +0.6
Or see this region's nucleotide sequence