Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07880 and AZOBR_RS07885 are separated by 92 nucleotides
AZOBR_RS07880: AZOBR_RS07880 - conserved exported protein of unknown function, at 1,660,793 to 1,660,999
_RS07880
AZOBR_RS07885: AZOBR_RS07885 - spermidine/putrescine ABC transporter substrate-binding protein, at 1,661,092 to 1,662,393
_RS07885
Position (kb)
1660
1661 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1659.897 kb on + strand at 1659.898 kb on - strand at 1659.898 kb on - strand at 1659.898 kb on - strand at 1659.993 kb on + strand at 1659.994 kb on - strand at 1659.994 kb on - strand at 1660.159 kb on + strand at 1660.159 kb on + strand at 1660.160 kb on - strand at 1660.160 kb on - strand at 1660.333 kb on + strand at 1660.334 kb on - strand at 1660.334 kb on - strand at 1660.361 kb on - strand at 1660.728 kb on - strand at 1661.093 kb on + strand at 1661.300 kb on + strand, within AZOBR_RS07885 at 1661.301 kb on - strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.372 kb on + strand, within AZOBR_RS07885 at 1661.373 kb on - strand, within AZOBR_RS07885 at 1661.373 kb on - strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.705 kb on + strand, within AZOBR_RS07885 at 1661.706 kb on - strand, within AZOBR_RS07885 at 1661.706 kb on - strand, within AZOBR_RS07885 at 1661.706 kb on - strand, within AZOBR_RS07885 at 1661.706 kb on - strand, within AZOBR_RS07885 at 1661.706 kb on - strand, within AZOBR_RS07885 at 1661.706 kb on - strand, within AZOBR_RS07885 at 1661.750 kb on + strand, within AZOBR_RS07885 at 1661.750 kb on + strand, within AZOBR_RS07885 at 1661.750 kb on + strand, within AZOBR_RS07885 at 1661.751 kb on - strand, within AZOBR_RS07885 at 1661.751 kb on - strand, within AZOBR_RS07885 at 1661.751 kb on - strand, within AZOBR_RS07885 at 1661.885 kb on + strand, within AZOBR_RS07885 at 1661.886 kb on - strand, within AZOBR_RS07885
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,659,897 + -0.4 1,659,898 - -0.3 1,659,898 - +0.1 1,659,898 - -0.8 1,659,993 + -1.6 1,659,994 - -0.0 1,659,994 - -0.9 1,660,159 + -2.0 1,660,159 + -0.6 1,660,160 - -0.6 1,660,160 - +1.1 1,660,333 + +0.2 1,660,334 - +0.4 1,660,334 - -2.6 1,660,361 - +0.4 1,660,728 - +1.3 1,661,093 + -2.3 1,661,300 + AZOBR_RS07885 0.16 -0.5 1,661,301 - AZOBR_RS07885 0.16 -0.1 1,661,372 + AZOBR_RS07885 0.22 -1.5 1,661,372 + AZOBR_RS07885 0.22 +0.6 1,661,372 + AZOBR_RS07885 0.22 -0.3 1,661,372 + AZOBR_RS07885 0.22 +1.4 1,661,372 + AZOBR_RS07885 0.22 +0.0 1,661,372 + AZOBR_RS07885 0.22 +0.5 1,661,372 + AZOBR_RS07885 0.22 +0.9 1,661,372 + AZOBR_RS07885 0.22 -0.4 1,661,373 - AZOBR_RS07885 0.22 -1.6 1,661,373 - AZOBR_RS07885 0.22 +2.4 1,661,705 + AZOBR_RS07885 0.47 -1.1 1,661,705 + AZOBR_RS07885 0.47 +0.6 1,661,705 + AZOBR_RS07885 0.47 +2.2 1,661,705 + AZOBR_RS07885 0.47 +1.0 1,661,705 + AZOBR_RS07885 0.47 -0.5 1,661,705 + AZOBR_RS07885 0.47 -0.8 1,661,705 + AZOBR_RS07885 0.47 -2.0 1,661,706 - AZOBR_RS07885 0.47 -2.7 1,661,706 - AZOBR_RS07885 0.47 +0.4 1,661,706 - AZOBR_RS07885 0.47 +0.1 1,661,706 - AZOBR_RS07885 0.47 +0.4 1,661,706 - AZOBR_RS07885 0.47 -0.1 1,661,706 - AZOBR_RS07885 0.47 +0.1 1,661,750 + AZOBR_RS07885 0.51 -3.5 1,661,750 + AZOBR_RS07885 0.51 +0.3 1,661,750 + AZOBR_RS07885 0.51 -0.7 1,661,751 - AZOBR_RS07885 0.51 +0.0 1,661,751 - AZOBR_RS07885 0.51 +1.6 1,661,751 - AZOBR_RS07885 0.51 +0.2 1,661,885 + AZOBR_RS07885 0.61 -1.1 1,661,886 - AZOBR_RS07885 0.61 +0.4
Or see this region's nucleotide sequence