Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26765 and AO353_26770 are separated by 126 nucleotides AO353_26770 and AO353_26775 overlap by 13 nucleotides AO353_26775 and AO353_26780 are separated by 96 nucleotides
AO353_26765: AO353_26765 - magnesium-translocating P-type ATPase, at 5,860,569 to 5,863,283
_26765
AO353_26770: AO353_26770 - Na/Pi cotransporter, at 5,863,410 to 5,865,104
_26770
AO353_26775: AO353_26775 - hypothetical protein, at 5,865,092 to 5,865,445
_26775
AO353_26780: AO353_26780 - DNA topoisomerase III, at 5,865,542 to 5,867,485
_26780
Position (kb)
5863
5864
5865
5866 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5862.548 kb on + strand, within AO353_26765 at 5862.675 kb on + strand, within AO353_26765 at 5862.676 kb on - strand, within AO353_26765 at 5862.792 kb on + strand, within AO353_26765 at 5862.792 kb on + strand, within AO353_26765 at 5862.792 kb on + strand, within AO353_26765 at 5862.792 kb on + strand, within AO353_26765 at 5862.793 kb on - strand, within AO353_26765 at 5862.793 kb on - strand, within AO353_26765 at 5862.793 kb on - strand, within AO353_26765 at 5862.793 kb on - strand, within AO353_26765 at 5862.793 kb on - strand, within AO353_26765 at 5862.840 kb on + strand, within AO353_26765 at 5862.948 kb on + strand, within AO353_26765 at 5862.949 kb on - strand, within AO353_26765 at 5862.949 kb on - strand, within AO353_26765 at 5862.949 kb on - strand, within AO353_26765 at 5863.131 kb on + strand at 5863.131 kb on + strand at 5863.131 kb on + strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.132 kb on - strand at 5863.188 kb on + strand at 5863.188 kb on + strand at 5863.189 kb on - strand at 5863.221 kb on + strand at 5863.222 kb on - strand at 5863.254 kb on + strand at 5863.254 kb on + strand at 5863.254 kb on + strand at 5863.255 kb on - strand at 5863.255 kb on - strand at 5863.255 kb on - strand at 5863.351 kb on - strand at 5863.351 kb on - strand at 5863.351 kb on - strand at 5863.353 kb on - strand at 5863.353 kb on - strand at 5863.353 kb on - strand at 5863.353 kb on - strand at 5863.391 kb on + strand at 5863.391 kb on + strand at 5863.392 kb on - strand at 5863.392 kb on - strand at 5863.392 kb on - strand at 5863.421 kb on + strand at 5863.421 kb on + strand at 5863.421 kb on + strand at 5863.421 kb on + strand at 5863.421 kb on + strand at 5863.421 kb on + strand at 5863.421 kb on + strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.422 kb on - strand at 5863.426 kb on + strand at 5863.426 kb on + strand at 5863.427 kb on - strand at 5863.427 kb on - strand at 5863.427 kb on - strand at 5863.427 kb on - strand at 5863.475 kb on + strand at 5863.475 kb on + strand at 5863.476 kb on - strand at 5863.746 kb on - strand, within AO353_26770 at 5863.798 kb on - strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.853 kb on + strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5863.854 kb on - strand, within AO353_26770 at 5864.367 kb on + strand, within AO353_26770 at 5864.367 kb on + strand, within AO353_26770 at 5864.367 kb on + strand, within AO353_26770 at 5864.516 kb on - strand at 5864.516 kb on - strand at 5864.565 kb on + strand, within AO353_26770 at 5864.829 kb on + strand, within AO353_26770 at 5864.830 kb on - strand, within AO353_26770 at 5864.830 kb on - strand, within AO353_26770 at 5865.053 kb on + strand at 5865.054 kb on - strand at 5865.120 kb on - strand at 5865.120 kb on - strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.122 kb on + strand at 5865.123 kb on - strand at 5865.123 kb on - strand at 5865.123 kb on - strand at 5865.137 kb on - strand, within AO353_26775 at 5865.496 kb on - strand at 5865.695 kb on + strand at 5865.695 kb on + strand at 5865.696 kb on - strand at 5865.696 kb on - strand at 5865.696 kb on - strand at 5865.707 kb on + strand at 5865.709 kb on + strand at 5865.710 kb on - strand at 5865.998 kb on + strand, within AO353_26780 at 5865.998 kb on + strand, within AO353_26780 at 5865.998 kb on + strand, within AO353_26780 at 5865.999 kb on - strand, within AO353_26780 at 5865.999 kb on - strand, within AO353_26780
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 5,862,548 + AO353_26765 0.73 -0.2 5,862,675 + AO353_26765 0.78 -0.2 5,862,676 - AO353_26765 0.78 -0.8 5,862,792 + AO353_26765 0.82 +0.1 5,862,792 + AO353_26765 0.82 +0.1 5,862,792 + AO353_26765 0.82 -0.3 5,862,792 + AO353_26765 0.82 -3.2 5,862,793 - AO353_26765 0.82 +1.1 5,862,793 - AO353_26765 0.82 +1.5 5,862,793 - AO353_26765 0.82 +0.5 5,862,793 - AO353_26765 0.82 -0.2 5,862,793 - AO353_26765 0.82 -0.8 5,862,840 + AO353_26765 0.84 +0.7 5,862,948 + AO353_26765 0.88 -0.1 5,862,949 - AO353_26765 0.88 -0.7 5,862,949 - AO353_26765 0.88 -0.8 5,862,949 - AO353_26765 0.88 +1.7 5,863,131 + -0.2 5,863,131 + +1.1 5,863,131 + -0.9 5,863,132 - +0.6 5,863,132 - +0.1 5,863,132 - -0.3 5,863,132 - -0.6 5,863,132 - -1.9 5,863,132 - -0.3 5,863,132 - +0.1 5,863,132 - -0.4 5,863,188 + -0.3 5,863,188 + -0.9 5,863,189 - +0.3 5,863,221 + -1.5 5,863,222 - -0.5 5,863,254 + -0.4 5,863,254 + +0.7 5,863,254 + -0.7 5,863,255 - -1.9 5,863,255 - -0.8 5,863,255 - +0.9 5,863,351 - +0.4 5,863,351 - -0.1 5,863,351 - +0.5 5,863,353 - -0.3 5,863,353 - -0.7 5,863,353 - +1.1 5,863,353 - +0.2 5,863,391 + +0.7 5,863,391 + -0.1 5,863,392 - +0.5 5,863,392 - +0.7 5,863,392 - -0.2 5,863,421 + +0.6 5,863,421 + +0.1 5,863,421 + -1.7 5,863,421 + +0.1 5,863,421 + -0.8 5,863,421 + +1.6 5,863,421 + -1.4 5,863,422 - -1.3 5,863,422 - +0.1 5,863,422 - +1.3 5,863,422 - -0.0 5,863,422 - -0.3 5,863,422 - -1.5 5,863,422 - +1.7 5,863,422 - +0.1 5,863,422 - +0.1 5,863,422 - -0.5 5,863,426 + -0.9 5,863,426 + -0.6 5,863,427 - +1.1 5,863,427 - +0.6 5,863,427 - +0.3 5,863,427 - +0.9 5,863,475 + -0.7 5,863,475 + -0.7 5,863,476 - -1.2 5,863,746 - AO353_26770 0.20 +0.3 5,863,798 - AO353_26770 0.23 +0.5 5,863,853 + AO353_26770 0.26 +0.7 5,863,853 + AO353_26770 0.26 +0.7 5,863,853 + AO353_26770 0.26 +1.1 5,863,853 + AO353_26770 0.26 +0.1 5,863,853 + AO353_26770 0.26 -0.9 5,863,853 + AO353_26770 0.26 -1.5 5,863,853 + AO353_26770 0.26 -0.8 5,863,853 + AO353_26770 0.26 +1.1 5,863,853 + AO353_26770 0.26 +0.9 5,863,854 - AO353_26770 0.26 -1.1 5,863,854 - AO353_26770 0.26 +0.2 5,863,854 - AO353_26770 0.26 -0.6 5,863,854 - AO353_26770 0.26 -0.5 5,863,854 - AO353_26770 0.26 -0.2 5,863,854 - AO353_26770 0.26 -0.9 5,863,854 - AO353_26770 0.26 +0.1 5,863,854 - AO353_26770 0.26 -1.0 5,863,854 - AO353_26770 0.26 -0.2 5,864,367 + AO353_26770 0.56 -0.2 5,864,367 + AO353_26770 0.56 +2.1 5,864,367 + AO353_26770 0.56 -1.2 5,864,516 - -0.9 5,864,516 - +2.1 5,864,565 + AO353_26770 0.68 +0.4 5,864,829 + AO353_26770 0.84 +0.5 5,864,830 - AO353_26770 0.84 +1.1 5,864,830 - AO353_26770 0.84 -0.7 5,865,053 + +0.3 5,865,054 - -0.5 5,865,120 - -0.9 5,865,120 - +0.1 5,865,122 + -0.4 5,865,122 + +0.1 5,865,122 + +1.1 5,865,122 + -0.7 5,865,122 + -1.0 5,865,122 + -0.2 5,865,122 + +0.5 5,865,122 + +0.6 5,865,123 - -1.2 5,865,123 - -0.4 5,865,123 - -0.2 5,865,137 - AO353_26775 0.13 -1.2 5,865,496 - +0.2 5,865,695 + -0.1 5,865,695 + -0.1 5,865,696 - -0.1 5,865,696 - +0.1 5,865,696 - +1.5 5,865,707 + -0.1 5,865,709 + -0.7 5,865,710 - +1.1 5,865,998 + AO353_26780 0.23 -0.1 5,865,998 + AO353_26780 0.23 +0.1 5,865,998 + AO353_26780 0.23 -0.9 5,865,999 - AO353_26780 0.24 +0.4 5,865,999 - AO353_26780 0.24 -0.5
Or see this region's nucleotide sequence