Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03915 and AO353_03920 are separated by 96 nucleotides AO353_03920 and AO353_03925 are separated by 5 nucleotides AO353_03925 and AO353_03930 are separated by 174 nucleotides AO353_03930 and AO353_03935 are separated by 58 nucleotides
AO353_03915: AO353_03915 - LysR family transcriptional regulator, at 837,965 to 838,858
_03915
AO353_03920: AO353_03920 - acetyltransferase, at 838,955 to 839,356
_03920
AO353_03925: AO353_03925 - lysine transporter LysE, at 839,362 to 839,964
_03925
AO353_03930: AO353_03930 - superoxide dismutase, at 840,139 to 840,735
_03930
AO353_03935: AO353_03935 - fructose-bisphosphate aldolase, at 840,794 to 841,087
_03935
Position (kb) 839
840 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.846 kb on + strand at 838.846 kb on + strand at 838.847 kb on - strand at 839.021 kb on + strand, within AO353_03920 at 839.022 kb on - strand, within AO353_03920 at 839.022 kb on - strand, within AO353_03920 at 839.022 kb on - strand, within AO353_03920 at 839.033 kb on - strand, within AO353_03920 at 839.153 kb on + strand, within AO353_03920 at 839.153 kb on + strand, within AO353_03920 at 839.153 kb on + strand, within AO353_03920 at 839.154 kb on - strand, within AO353_03920 at 839.154 kb on - strand, within AO353_03920 at 839.273 kb on + strand, within AO353_03920 at 839.274 kb on - strand, within AO353_03920 at 839.355 kb on - strand at 839.355 kb on - strand at 839.355 kb on - strand at 839.355 kb on - strand at 839.355 kb on - strand at 839.361 kb on + strand at 839.361 kb on + strand at 839.361 kb on + strand at 839.361 kb on + strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.374 kb on + strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.737 kb on + strand, within AO353_03925 at 839.737 kb on + strand, within AO353_03925 at 839.737 kb on + strand, within AO353_03925 at 839.737 kb on + strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.966 kb on + strand at 839.966 kb on + strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.990 kb on + strand at 839.990 kb on + strand at 839.991 kb on - strand at 839.991 kb on - strand at 840.015 kb on - strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.034 kb on - strand at 840.034 kb on - strand at 840.034 kb on - strand at 840.061 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.734 kb on - strand at 840.734 kb on - strand at 840.734 kb on - strand at 840.778 kb on + strand at 840.909 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand at 840.945 kb on + strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.962 kb on - strand, within AO353_03935
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 838,499 + AO353_03915 0.60 +0.3 838,499 + AO353_03915 0.60 +0.1 838,499 + AO353_03915 0.60 +2.1 838,499 + AO353_03915 0.60 +1.4 838,499 + AO353_03915 0.60 -0.1 838,499 + AO353_03915 0.60 -0.7 838,499 + AO353_03915 0.60 -0.2 838,499 + AO353_03915 0.60 -0.1 838,499 + AO353_03915 0.60 -0.7 838,500 - AO353_03915 0.60 -0.7 838,500 - AO353_03915 0.60 -0.1 838,500 - AO353_03915 0.60 +0.9 838,500 - AO353_03915 0.60 -0.3 838,500 - AO353_03915 0.60 +0.1 838,500 - AO353_03915 0.60 -0.6 838,500 - AO353_03915 0.60 +0.2 838,500 - AO353_03915 0.60 -1.6 838,500 - +2.2 838,500 - AO353_03915 0.60 -0.7 838,500 - AO353_03915 0.60 +0.7 838,500 - AO353_03915 0.60 +2.7 838,500 - AO353_03915 0.60 -1.1 838,500 - AO353_03915 0.60 +0.1 838,500 - AO353_03915 0.60 +0.4 838,500 - AO353_03915 0.60 -0.5 838,500 - AO353_03915 0.60 -0.9 838,846 + +0.4 838,846 + +0.1 838,847 - -0.9 839,021 + AO353_03920 0.16 -0.2 839,022 - AO353_03920 0.17 +0.9 839,022 - AO353_03920 0.17 +0.1 839,022 - AO353_03920 0.17 -0.5 839,033 - AO353_03920 0.19 +0.4 839,153 + AO353_03920 0.49 +1.4 839,153 + AO353_03920 0.49 -0.5 839,153 + AO353_03920 0.49 +0.3 839,154 - AO353_03920 0.50 -0.9 839,154 - AO353_03920 0.50 -0.3 839,273 + AO353_03920 0.79 -0.7 839,274 - AO353_03920 0.79 -1.1 839,355 - -1.0 839,355 - -0.3 839,355 - -0.7 839,355 - +0.8 839,355 - -0.3 839,361 + -1.1 839,361 + +0.4 839,361 + +0.8 839,361 + -0.7 839,362 - +0.3 839,362 - +0.1 839,362 - +0.6 839,362 - -0.1 839,362 - -0.7 839,362 - +0.7 839,362 - +0.9 839,362 - +0.1 839,362 - -0.2 839,374 + -0.4 839,375 - -1.7 839,375 - +2.3 839,375 - +2.4 839,375 - -0.7 839,375 - +0.3 839,737 + AO353_03925 0.62 +1.1 839,737 + AO353_03925 0.62 -0.1 839,737 + AO353_03925 0.62 +0.6 839,737 + AO353_03925 0.62 -0.7 839,738 - AO353_03925 0.62 -0.1 839,738 - AO353_03925 0.62 +1.2 839,738 - AO353_03925 0.62 +1.1 839,738 - AO353_03925 0.62 +0.3 839,738 - AO353_03925 0.62 +0.9 839,738 - AO353_03925 0.62 +0.1 839,797 + AO353_03925 0.72 -0.2 839,797 + AO353_03925 0.72 +0.2 839,797 + AO353_03925 0.72 +1.1 839,797 + AO353_03925 0.72 -1.1 839,797 + AO353_03925 0.72 +0.2 839,798 - AO353_03925 0.72 +0.3 839,798 - AO353_03925 0.72 +0.7 839,798 - AO353_03925 0.72 +0.5 839,798 - AO353_03925 0.72 -1.0 839,798 - AO353_03925 0.72 -0.3 839,798 - AO353_03925 0.72 -0.2 839,798 - AO353_03925 0.72 +1.7 839,798 - AO353_03925 0.72 +2.2 839,801 + AO353_03925 0.73 -0.9 839,801 + AO353_03925 0.73 +0.1 839,801 + AO353_03925 0.73 -0.3 839,801 + AO353_03925 0.73 +0.0 839,801 + AO353_03925 0.73 +0.1 839,802 - AO353_03925 0.73 +2.1 839,802 - AO353_03925 0.73 +3.0 839,802 - AO353_03925 0.73 -0.1 839,966 + -0.0 839,966 + -1.0 839,970 - -0.3 839,970 - +0.3 839,970 - -0.4 839,970 - +0.5 839,970 - -0.9 839,990 + +1.1 839,990 + +0.2 839,991 - -0.8 839,991 - -0.4 840,015 - -0.6 840,033 + +1.7 840,033 + -0.8 840,033 + +0.3 840,033 + -0.6 840,034 - +0.7 840,034 - -1.4 840,034 - +1.3 840,061 + -0.5 840,733 + +0.7 840,733 + -1.6 840,733 + -1.6 840,733 + -0.5 840,734 - -2.9 840,734 - -0.3 840,734 - -0.5 840,778 + +0.9 840,909 + AO353_03935 0.39 -0.1 840,945 + AO353_03935 0.51 +0.5 840,945 + AO353_03935 0.51 -0.6 840,945 + AO353_03935 0.51 -0.3 840,945 + AO353_03935 0.51 +0.0 840,945 + +2.7 840,945 + AO353_03935 0.51 +0.4 840,946 - AO353_03935 0.52 +0.3 840,946 - AO353_03935 0.52 +0.4 840,946 - AO353_03935 0.52 -0.1 840,962 - AO353_03935 0.57 -0.5
Or see this region's nucleotide sequence