Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03165 and AO353_03170 are separated by 227 nucleotides AO353_03170 and AO353_03175 are separated by 43 nucleotides AO353_03175 and AO353_03180 are separated by 37 nucleotides
AO353_03165: AO353_03165 - magnesium transporter CorA, at 675,455 to 676,477
_03165
AO353_03170: AO353_03170 - nuclease PIN, at 676,705 to 678,321
_03170
AO353_03175: AO353_03175 - hypothetical protein, at 678,365 to 678,877
_03175
AO353_03180: AO353_03180 - transcriptional regulator, at 678,915 to 679,811
_03180
Position (kb) 676
677
678
679 Strain fitness (log2 ratio) -2
-1
0
1
2 at 676.472 kb on + strand at 676.473 kb on - strand at 676.475 kb on + strand at 676.475 kb on + strand at 676.476 kb on - strand at 676.476 kb on - strand at 676.476 kb on - strand at 676.487 kb on + strand at 676.487 kb on + strand at 676.487 kb on + strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.494 kb on + strand at 676.494 kb on + strand at 676.494 kb on + strand at 676.578 kb on + strand at 676.578 kb on + strand at 676.578 kb on + strand at 676.578 kb on + strand at 676.584 kb on + strand at 676.585 kb on - strand at 676.585 kb on - strand at 676.585 kb on - strand at 676.649 kb on + strand at 676.650 kb on - strand at 676.650 kb on - strand at 676.710 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.785 kb on - strand at 676.785 kb on - strand at 676.788 kb on + strand at 676.789 kb on - strand at 676.840 kb on + strand at 676.904 kb on + strand, within AO353_03170 at 676.904 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 677.419 kb on + strand, within AO353_03170 at 677.420 kb on - strand, within AO353_03170 at 677.420 kb on - strand, within AO353_03170 at 677.420 kb on - strand, within AO353_03170 at 677.707 kb on + strand, within AO353_03170 at 677.708 kb on - strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.080 kb on - strand, within AO353_03170 at 678.080 kb on - strand, within AO353_03170 at 678.080 kb on - strand, within AO353_03170 at 678.295 kb on + strand at 678.295 kb on + strand at 678.296 kb on - strand at 678.335 kb on + strand at 678.335 kb on + strand at 678.336 kb on - strand at 678.336 kb on - strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.379 kb on - strand at 678.379 kb on - strand at 678.433 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.687 kb on - strand, within AO353_03175 at 678.687 kb on - strand, within AO353_03175 at 678.687 kb on - strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.751 kb on - strand, within AO353_03175 at 678.751 kb on - strand, within AO353_03175 at 678.777 kb on + strand, within AO353_03175 at 678.777 kb on + strand, within AO353_03175 at 678.863 kb on + strand at 678.863 kb on + strand at 678.863 kb on + strand at 678.864 kb on - strand at 678.864 kb on - strand at 678.891 kb on - strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.910 kb on - strand at 678.910 kb on - strand at 678.910 kb on - strand at 678.910 kb on - strand at 678.970 kb on - strand at 678.994 kb on + strand at 678.994 kb on + strand at 678.995 kb on - strand at 678.995 kb on - strand at 679.066 kb on + strand, within AO353_03180 at 679.066 kb on + strand, within AO353_03180 at 679.067 kb on - strand, within AO353_03180 at 679.129 kb on + strand, within AO353_03180 at 679.140 kb on - strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.199 kb on - strand, within AO353_03180 at 679.199 kb on - strand, within AO353_03180 at 679.199 kb on - strand, within AO353_03180 at 679.228 kb on - strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.289 kb on - strand, within AO353_03180 at 679.301 kb on - strand, within AO353_03180 at 679.301 kb on - strand, within AO353_03180
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 676,472 + -1.7 676,473 - +1.6 676,475 + +0.6 676,475 + +0.4 676,476 - -1.6 676,476 - +1.2 676,476 - +1.3 676,487 + -0.6 676,487 + -0.4 676,487 + +1.6 676,488 - -0.0 676,488 - +1.4 676,488 - -0.2 676,488 - +1.2 676,488 - +0.4 676,494 + +0.7 676,494 + -0.0 676,494 + +0.8 676,578 + -0.7 676,578 + +1.3 676,578 + -0.4 676,578 + -0.5 676,584 + +0.3 676,585 - -0.9 676,585 - -0.9 676,585 - +0.2 676,649 + -1.0 676,650 - +2.6 676,650 - +1.0 676,710 + -1.6 676,784 + -0.4 676,784 + -1.2 676,784 + -0.5 676,784 + -0.5 676,784 + +0.3 676,785 - +0.8 676,785 - -0.4 676,788 + -0.6 676,789 - -0.7 676,840 + -0.6 676,904 + AO353_03170 0.12 +0.1 676,904 + AO353_03170 0.12 -0.2 676,990 + AO353_03170 0.18 -0.8 676,990 + AO353_03170 0.18 +0.3 676,990 + AO353_03170 0.18 -1.0 676,990 + AO353_03170 0.18 +1.3 676,990 + AO353_03170 0.18 +0.6 676,991 - AO353_03170 0.18 -0.6 676,991 - AO353_03170 0.18 +0.2 676,991 - AO353_03170 0.18 -0.3 676,991 - AO353_03170 0.18 -0.1 676,991 - AO353_03170 0.18 -0.1 676,991 - AO353_03170 0.18 +0.8 677,419 + AO353_03170 0.44 -1.6 677,420 - AO353_03170 0.44 -0.0 677,420 - AO353_03170 0.44 -0.8 677,420 - AO353_03170 0.44 -0.2 677,707 + AO353_03170 0.62 -1.4 677,708 - AO353_03170 0.62 -0.1 677,848 + AO353_03170 0.71 -1.0 677,848 + +0.6 677,848 + AO353_03170 0.71 +0.6 677,848 + AO353_03170 0.71 -0.4 677,848 + AO353_03170 0.71 -0.0 677,848 + AO353_03170 0.71 -0.2 677,848 + AO353_03170 0.71 -0.4 677,848 + AO353_03170 0.71 -0.0 677,848 + AO353_03170 0.71 -0.2 677,848 + AO353_03170 0.71 +0.7 677,848 + AO353_03170 0.71 -0.9 677,848 + AO353_03170 0.71 -0.4 677,848 + AO353_03170 0.71 -1.1 677,848 + AO353_03170 0.71 -0.0 677,849 - AO353_03170 0.71 -0.2 677,849 - AO353_03170 0.71 -1.2 677,849 - AO353_03170 0.71 +1.3 677,849 - AO353_03170 0.71 +0.4 677,849 - AO353_03170 0.71 +1.1 677,849 - AO353_03170 0.71 -0.3 677,849 - AO353_03170 0.71 -0.4 677,849 - AO353_03170 0.71 +0.4 677,849 - AO353_03170 0.71 -0.0 677,849 - AO353_03170 0.71 -0.7 677,849 - +0.6 678,079 + AO353_03170 0.85 -0.1 678,079 + AO353_03170 0.85 -0.7 678,079 + AO353_03170 0.85 -0.4 678,079 + AO353_03170 0.85 +0.8 678,079 + AO353_03170 0.85 +0.3 678,080 - AO353_03170 0.85 +0.3 678,080 - AO353_03170 0.85 -0.8 678,080 - AO353_03170 0.85 +0.1 678,295 + -0.2 678,295 + +0.7 678,296 - -0.2 678,335 + +0.6 678,335 + -1.7 678,336 - +0.4 678,336 - +0.4 678,378 + -0.0 678,378 + -0.0 678,378 + -2.2 678,378 + +0.2 678,378 + +0.1 678,378 + +0.4 678,379 - +1.2 678,379 - -1.9 678,433 + AO353_03175 0.13 -0.4 678,686 + AO353_03175 0.63 -1.0 678,686 + AO353_03175 0.63 +0.7 678,686 + AO353_03175 0.63 +1.2 678,686 + AO353_03175 0.63 +0.3 678,686 + AO353_03175 0.63 -0.5 678,686 + AO353_03175 0.63 +0.8 678,687 - AO353_03175 0.63 +0.2 678,687 - AO353_03175 0.63 -1.4 678,687 - AO353_03175 0.63 +0.2 678,725 + AO353_03175 0.70 -0.7 678,725 + AO353_03175 0.70 -1.4 678,725 + AO353_03175 0.70 -1.2 678,725 + AO353_03175 0.70 -0.1 678,725 + AO353_03175 0.70 +0.2 678,725 + AO353_03175 0.70 +0.3 678,725 + AO353_03175 0.70 -0.2 678,751 - AO353_03175 0.75 -0.7 678,751 - AO353_03175 0.75 -0.0 678,777 + AO353_03175 0.80 -0.6 678,777 + AO353_03175 0.80 +0.3 678,863 + +1.6 678,863 + -0.4 678,863 + -0.1 678,864 - -0.2 678,864 - +0.2 678,891 - -0.9 678,909 + -0.1 678,909 + +0.3 678,909 + +0.6 678,909 + -0.1 678,909 + +0.7 678,909 + -0.1 678,910 - -0.6 678,910 - -0.7 678,910 - -1.4 678,910 - +1.6 678,970 - -1.0 678,994 + +0.0 678,994 + -1.7 678,995 - -1.5 678,995 - +0.6 679,066 + AO353_03180 0.17 +0.3 679,066 + AO353_03180 0.17 -0.4 679,067 - AO353_03180 0.17 +0.2 679,129 + AO353_03180 0.24 +1.3 679,140 - AO353_03180 0.25 -0.3 679,142 + AO353_03180 0.25 +0.0 679,142 + AO353_03180 0.25 +0.6 679,142 + AO353_03180 0.25 -0.1 679,142 + AO353_03180 0.25 +0.6 679,198 + AO353_03180 0.32 +0.6 679,198 + AO353_03180 0.32 -0.5 679,198 + AO353_03180 0.32 -1.3 679,198 + AO353_03180 0.32 +0.2 679,199 - AO353_03180 0.32 +0.1 679,199 - AO353_03180 0.32 +1.2 679,199 - AO353_03180 0.32 -1.7 679,228 - AO353_03180 0.35 +0.4 679,237 + AO353_03180 0.36 +0.2 679,237 + AO353_03180 0.36 -1.0 679,237 + AO353_03180 0.36 -0.2 679,237 + AO353_03180 0.36 +1.1 679,237 + AO353_03180 0.36 -1.1 679,237 + AO353_03180 0.36 -0.1 679,238 - AO353_03180 0.36 +0.3 679,238 - AO353_03180 0.36 -0.0 679,238 - AO353_03180 0.36 +0.3 679,238 - AO353_03180 0.36 +0.7 679,238 - AO353_03180 0.36 +0.1 679,289 - AO353_03180 0.42 +1.0 679,301 - AO353_03180 0.43 -0.9 679,301 - AO353_03180 0.43 +0.1
Or see this region's nucleotide sequence