Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01370 and AO353_01375 are separated by 126 nucleotides AO353_01375 and AO353_01380 are separated by 33 nucleotides AO353_01380 and AO353_01385 are separated by 13 nucleotides AO353_01385 and AO353_01390 are separated by 105 nucleotides
AO353_01370: AO353_01370 - malonyl CoA-ACP transacylase, at 294,782 to 295,720
_01370
AO353_01375: AO353_01375 - phosphate acyltransferase, at 295,847 to 296,827
_01375
AO353_01380: AO353_01380 - 50S ribosomal protein L32, at 296,861 to 297,043
_01380
AO353_01385: AO353_01385 - metal-binding protein, at 297,057 to 297,584
_01385
AO353_01390: AO353_01390 - septum formation inhibitor Maf, at 297,690 to 298,268
_01390
Position (kb) 295
296
297 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 295.767 kb on - strand at 295.802 kb on - strand at 295.802 kb on - strand at 295.824 kb on + strand at 295.824 kb on + strand at 295.824 kb on + strand at 295.824 kb on + strand at 295.825 kb on - strand at 295.825 kb on - strand at 295.825 kb on - strand at 295.825 kb on - strand at 295.825 kb on - strand at 295.825 kb on - strand at 295.849 kb on - strand at 295.943 kb on + strand at 295.943 kb on + strand at 295.943 kb on + strand at 295.943 kb on + strand at 295.944 kb on - strand at 295.944 kb on - strand at 295.944 kb on - strand at 295.966 kb on + strand, within AO353_01375 at 295.966 kb on + strand, within AO353_01375 at 295.967 kb on - strand, within AO353_01375 at 296.005 kb on + strand, within AO353_01375 at 296.005 kb on + strand, within AO353_01375 at 296.005 kb on + strand, within AO353_01375 at 296.006 kb on - strand at 296.006 kb on - strand, within AO353_01375 at 296.034 kb on - strand, within AO353_01375 at 296.034 kb on - strand, within AO353_01375 at 296.202 kb on + strand, within AO353_01375 at 296.203 kb on - strand, within AO353_01375 at 296.232 kb on + strand, within AO353_01375 at 296.232 kb on + strand, within AO353_01375 at 296.232 kb on + strand, within AO353_01375 at 296.233 kb on - strand, within AO353_01375 at 296.233 kb on - strand, within AO353_01375 at 296.233 kb on - strand, within AO353_01375 at 296.233 kb on - strand, within AO353_01375 at 296.233 kb on - strand, within AO353_01375 at 296.233 kb on - strand, within AO353_01375 at 296.508 kb on + strand, within AO353_01375 at 296.508 kb on + strand, within AO353_01375 at 296.509 kb on - strand, within AO353_01375 at 296.509 kb on - strand, within AO353_01375 at 296.724 kb on - strand, within AO353_01375 at 296.768 kb on - strand at 297.689 kb on + strand at 297.690 kb on - strand at 297.690 kb on - strand at 297.690 kb on - strand at 297.690 kb on - strand at 297.700 kb on + strand at 297.700 kb on + strand at 297.700 kb on + strand at 297.701 kb on - strand at 297.703 kb on + strand at 297.703 kb on + strand at 297.703 kb on + strand at 297.703 kb on + strand at 297.703 kb on + strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.704 kb on - strand at 297.736 kb on + strand at 297.737 kb on - strand at 297.737 kb on - strand at 297.737 kb on - strand at 297.761 kb on + strand, within AO353_01390 at 297.762 kb on - strand, within AO353_01390 at 297.762 kb on - strand, within AO353_01390 at 297.824 kb on - strand, within AO353_01390 at 297.824 kb on - strand, within AO353_01390 at 297.824 kb on - strand, within AO353_01390
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 295,767 - -0.9 295,802 - -1.0 295,802 - -0.3 295,824 + -1.8 295,824 + -0.9 295,824 + -1.2 295,824 + +0.1 295,825 - -1.6 295,825 - -1.2 295,825 - +0.2 295,825 - +0.6 295,825 - +0.9 295,825 - -1.6 295,849 - -0.4 295,943 + -3.0 295,943 + +0.4 295,943 + -1.2 295,943 + -0.6 295,944 - -1.6 295,944 - -0.2 295,944 - +0.4 295,966 + AO353_01375 0.12 -1.0 295,966 + AO353_01375 0.12 -2.4 295,967 - AO353_01375 0.12 -1.9 296,005 + AO353_01375 0.16 -1.9 296,005 + AO353_01375 0.16 -0.2 296,005 + AO353_01375 0.16 -1.6 296,006 - -0.2 296,006 - AO353_01375 0.16 -1.9 296,034 - AO353_01375 0.19 -2.3 296,034 - AO353_01375 0.19 -1.9 296,202 + AO353_01375 0.36 -2.5 296,203 - AO353_01375 0.36 -2.4 296,232 + AO353_01375 0.39 -2.8 296,232 + AO353_01375 0.39 -1.6 296,232 + AO353_01375 0.39 -1.9 296,233 - AO353_01375 0.39 -1.6 296,233 - AO353_01375 0.39 -2.3 296,233 - AO353_01375 0.39 -1.2 296,233 - AO353_01375 0.39 -3.2 296,233 - AO353_01375 0.39 -2.0 296,233 - AO353_01375 0.39 -1.5 296,508 + AO353_01375 0.67 -2.3 296,508 + AO353_01375 0.67 -1.9 296,509 - AO353_01375 0.67 -1.2 296,509 - AO353_01375 0.67 +0.1 296,724 - AO353_01375 0.89 -0.2 296,768 - -1.2 297,689 + +0.4 297,690 - -0.4 297,690 - -1.7 297,690 - -1.0 297,690 - -0.6 297,700 + -0.2 297,700 + +0.2 297,700 + -0.2 297,701 - +0.6 297,703 + -1.3 297,703 + -0.3 297,703 + -1.0 297,703 + +1.0 297,703 + -0.4 297,704 - +0.3 297,704 - -0.2 297,704 - -3.7 297,704 - -1.1 297,704 - -0.2 297,704 - -0.8 297,704 - -0.4 297,704 - -0.1 297,704 - -0.7 297,704 - +0.4 297,704 - +0.0 297,736 + -1.4 297,737 - +0.2 297,737 - +0.8 297,737 - +0.0 297,761 + AO353_01390 0.12 +0.0 297,762 - AO353_01390 0.12 -0.6 297,762 - AO353_01390 0.12 -1.6 297,824 - AO353_01390 0.23 -0.9 297,824 - AO353_01390 0.23 -1.0 297,824 - AO353_01390 0.23 +1.3
Or see this region's nucleotide sequence