Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006447

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
2,828,405	-		ABIE53_006446	0.28	-0.7
2,828,405	-		ABIE53_006446	0.28	-0.7
2,828,445	+		ABIE53_006446	0.31	+1.1
2,828,445	+		ABIE53_006446	0.31	-0.4
2,828,446	-		ABIE53_006446	0.32	+1.9
2,828,458	-		ABIE53_006446	0.33	-1.0
2,828,575	+		ABIE53_006446	0.43	+0.9
2,828,575	+		ABIE53_006446	0.43	+0.0
2,828,575	+		ABIE53_006446	0.43	+0.2
2,828,575	+		ABIE53_006446	0.43	+0.9
2,828,575	+		ABIE53_006446	0.43	+0.3
2,828,605	+		ABIE53_006446	0.46	+0.7
2,828,607	+		ABIE53_006446	0.46	+1.7
2,828,607	+		ABIE53_006446	0.46	-0.5
2,828,608	-		ABIE53_006446	0.46	+0.0
2,828,608	-		ABIE53_006446	0.46	-0.4
2,828,608	-		ABIE53_006446	0.46	-0.3
2,828,608	-		ABIE53_006446	0.46	-0.5
2,828,608	-		ABIE53_006446	0.46	+1.2
2,828,608	-		ABIE53_006446	0.46	+0.1
2,828,608	-		ABIE53_006446	0.46	-0.6
2,828,764	+		ABIE53_006446	0.60	+0.1
2,828,764	+		ABIE53_006446	0.60	-0.3
2,828,841	+		ABIE53_006446	0.66	-0.8
2,828,841	+		ABIE53_006446	0.66	-1.0
2,828,842	-		ABIE53_006446	0.66	+0.0
2,828,907	+		ABIE53_006446	0.72	-0.3
2,828,907	+		ABIE53_006446	0.72	+0.4
2,828,907	+		ABIE53_006446	0.72	-1.5
2,828,908	-		ABIE53_006446	0.72	-1.0
2,828,922	+		ABIE53_006446	0.73	-1.4
2,828,949	-		ABIE53_006446	0.76	+0.9
2,829,016	+		ABIE53_006446	0.82	+0.0
2,829,017	-		ABIE53_006446	0.82	+0.2
2,829,026	+		ABIE53_006446	0.83	-0.5
2,829,026	+		ABIE53_006446	0.83	-0.2
2,829,027	-		ABIE53_006446	0.83	-0.5
2,829,099	+		ABIE53_006446	0.89	+0.2
2,829,099	+		ABIE53_006446	0.89	-1.9
2,829,100	-		ABIE53_006446	0.89	+0.9
2,829,100	-		ABIE53_006446	0.89	+0.7
2,829,191	+				-0.4
2,829,191	+				-2.9
2,829,192	-				-0.3
2,829,192	-				-0.8
2,829,192	-				+0.5
2,829,192	-				-1.4
2,829,195	+				+2.5
2,829,195	+				+1.9
2,829,195	+				-1.0
2,829,195	+				-1.3
2,829,195	+				-0.7
2,829,195	+				+1.0
2,829,195	+				-1.0
2,829,196	-				-0.7
2,829,196	-				-0.6
2,829,196	-				-1.4
2,829,196	-				-0.9
2,829,196	-				+0.9
2,829,196	-				-0.3
2,829,258	+				-0.0
2,829,273	+				-1.0
2,829,273	+				+0.5
2,829,274	-				+2.2
2,829,274	-				+2.5
2,829,551	+		ABIE53_006447	0.17	+0.5
2,829,552	-		ABIE53_006447	0.17	-0.6
2,829,552	-		ABIE53_006447	0.17	-0.6
2,829,568	+		ABIE53_006447	0.19	-0.0
2,829,568	+		ABIE53_006447	0.19	+0.4
2,829,623	+		ABIE53_006447	0.25	+0.5
2,829,623	+		ABIE53_006447	0.25	+4.4
2,829,624	-		ABIE53_006447	0.25	+0.1
2,829,624	-		ABIE53_006447	0.25	+0.6
2,829,624	-		ABIE53_006447	0.25	+1.1
2,829,624	-		ABIE53_006447	0.25	-0.5
2,829,959	-		ABIE53_006447	0.60	-0.6
2,829,959	-		ABIE53_006447	0.60	-0.4
2,830,289	-				-0.3
2,830,386	+				+1.0
2,830,386	+				-0.7
2,830,386	+				-1.1
2,830,387	-				-0.1
2,830,387	-				+0.2
2,830,387	-				+0.3
2,830,387	-				-0.2
2,830,425	-				-0.6
2,830,425	-				-0.3
2,830,437	+				-0.3
2,830,438	-				-0.2
2,830,438	-				-1.1
2,830,438	-				+1.6
2,830,484	+				-1.5
2,830,484	+				-2.0
2,830,485	-				-1.0
2,830,485	-				+1.3
2,830,487	+				+0.0
2,830,487	+				-0.8
2,830,487	+				+1.9
2,830,488	-				-1.1
2,830,498	+				-0.6
2,830,499	-				+2.5
2,830,559	+				-0.8
2,830,559	+				-1.1
2,830,559	+				-0.9
2,830,560	-				-0.7
2,830,562	+				-1.0
2,830,563	-				-1.7
2,830,563	-				-1.4
2,830,593	+				-0.7
2,830,638	-				-1.5
2,830,638	-				-2.7
2,830,665	+				+0.0
2,830,666	-				+1.0
2,830,666	-				+0.8
2,830,717	-				-1.8
2,830,728	+				-2.2
2,830,728	+				+0.5
2,830,728	+				-0.7
2,830,728	+				-0.3
2,830,728	+				-1.6
2,830,728	+				+0.5
2,830,729	-				-0.7
2,830,729	-				-1.4
2,830,729	-				-3.2
2,830,729	-				+0.8
2,830,729	-				-0.2
2,830,729	-				-0.9
2,830,729	-				+0.3
2,830,729	-				+2.2
2,830,779	-				-0.7
2,830,829	+				-1.8
2,830,830	-				-0.6
2,830,830	-				-0.6
2,830,878	+				+0.6
2,830,878	+				-1.4
2,830,878	+				-2.1
2,830,878	+				-0.6
2,830,878	+				+0.0
2,830,878	+				-1.2
2,830,878	+				+1.5
2,830,878	+				-0.5
2,830,879	-				+0.9
2,830,917	+				+0.4
2,830,917	+				+0.2
2,830,917	+				+0.3
2,830,918	-				+1.5
2,830,918	-				-0.9
2,830,918	-				-1.6
2,830,971	+				-1.5
2,830,971	+				-1.0
2,830,971	+				-0.9
2,830,971	+				-0.2
2,830,972	-				+0.5
2,830,972	-				-0.4
2,830,972	-				+0.2
2,830,972	-				+0.9
2,830,983	-		ABIE53_006448	0.11	-2.6
2,830,983	-		ABIE53_006448	0.11	-0.4
2,831,004	-		ABIE53_006448	0.16	+0.2
2,831,108	+		ABIE53_006448	0.44	+0.7
2,831,108	+		ABIE53_006448	0.44	-0.2
2,831,108	+		ABIE53_006448	0.44	-2.3
2,831,108	+		ABIE53_006448	0.44	+2.3
2,831,108	+		ABIE53_006448	0.44	-0.9
2,831,109	-		ABIE53_006448	0.44	-0.5
2,831,109	-		ABIE53_006448	0.44	-0.3
2,831,205	+		ABIE53_006448	0.69	-1.7
2,831,205	+		ABIE53_006448	0.69	-1.1
2,831,205	+		ABIE53_006448	0.69	-1.4
2,831,205	+		ABIE53_006448	0.69	+0.2
2,831,205	+		ABIE53_006448	0.69	-0.1
2,831,205	+		ABIE53_006448	0.69	-0.7
2,831,205	+		ABIE53_006448	0.69	-1.3
2,831,205	+		ABIE53_006448	0.69	+0.2
2,831,205	+		ABIE53_006448	0.69	-0.2
2,831,205	+		ABIE53_006448	0.69	+2.2
2,831,205	+		ABIE53_006448	0.69	-0.7
2,831,205	+		ABIE53_006448	0.69	+1.8
2,831,205	+		ABIE53_006448	0.69	-2.4
2,831,205	+		ABIE53_006448	0.69	-1.5
2,831,206	-		ABIE53_006448	0.70	+0.3
2,831,206	-		ABIE53_006448	0.70	+0.6
2,831,206	-		ABIE53_006448	0.70	-0.7
2,831,206	-		ABIE53_006448	0.70	+0.1
2,831,206	-		ABIE53_006448	0.70	-2.1
2,831,207	+		ABIE53_006448	0.70	-0.4
2,831,207	+		ABIE53_006448	0.70	-1.3
2,831,207	+		ABIE53_006448	0.70	+1.5
2,831,207	+		ABIE53_006448	0.70	-0.5
2,831,207	+		ABIE53_006448	0.70	-0.5
2,831,208	-		ABIE53_006448	0.70	+0.3
2,831,208	-		ABIE53_006448	0.70	-1.1
2,831,208	-		ABIE53_006448	0.70	+0.0
2,831,282	+		ABIE53_006448	0.90	-0.5
2,831,318	+				-2.1
2,831,319	-				-0.1
2,831,319	-				-1.0