Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003677

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
4,133,306	+		ABIE53_003676	0.35	+2.2
4,133,307	-		ABIE53_003676	0.35	+0.3
4,133,352	+		ABIE53_003676	0.41	-1.9
4,133,352	+		ABIE53_003676	0.41	-1.0
4,133,352	+		ABIE53_003676	0.41	+1.9
4,133,352	+		ABIE53_003676	0.41	+0.2
4,133,352	+		ABIE53_003676	0.41	+0.1
4,133,352	+		ABIE53_003676	0.41	-0.6
4,133,352	+		ABIE53_003676	0.41	-0.8
4,133,353	-		ABIE53_003676	0.41	+0.6
4,133,353	-		ABIE53_003676	0.41	-2.5
4,133,353	-		ABIE53_003676	0.41	+0.4
4,133,353	-		ABIE53_003676	0.41	-1.1
4,133,353	-		ABIE53_003676	0.41	-1.4
4,133,357	-		ABIE53_003676	0.41	-1.4
4,133,357	-		ABIE53_003676	0.41	-1.9
4,133,402	-		ABIE53_003676	0.47	+0.5
4,133,458	+		ABIE53_003676	0.53	+0.3
4,133,458	+		ABIE53_003676	0.53	+1.1
4,133,458	+		ABIE53_003676	0.53	-0.2
4,133,459	-		ABIE53_003676	0.53	-0.5
4,133,459	-		ABIE53_003676	0.53	+1.0
4,133,459	-		ABIE53_003676	0.53	-0.2
4,133,459	-		ABIE53_003676	0.53	-0.3
4,133,565	+		ABIE53_003676	0.66	-0.7
4,133,565	+		ABIE53_003676	0.66	-1.3
4,133,565	+		ABIE53_003676	0.66	+1.5
4,133,565	+		ABIE53_003676	0.66	-0.7
4,133,565	+		ABIE53_003676	0.66	+1.2
4,133,566	-		ABIE53_003676	0.66	-1.2
4,133,566	-		ABIE53_003676	0.66	-0.4
4,133,566	-		ABIE53_003676	0.66	-1.1
4,133,619	+		ABIE53_003676	0.72	+0.5
4,133,619	+		ABIE53_003676	0.72	+2.3
4,133,619	+		ABIE53_003676	0.72	+1.2
4,133,619	+		ABIE53_003676	0.72	-0.1
4,133,619	+		ABIE53_003676	0.72	+1.4
4,133,619	+		ABIE53_003676	0.72	+1.5
4,133,619	+		ABIE53_003676	0.72	-1.0
4,133,619	+		ABIE53_003676	0.72	+1.2
4,133,619	+		ABIE53_003676	0.72	-0.9
4,133,619	+		ABIE53_003676	0.72	+1.4
4,133,619	+		ABIE53_003676	0.72	-0.9
4,133,620	-		ABIE53_003676	0.72	-0.3
4,133,620	-		ABIE53_003676	0.72	+1.4
4,133,620	-		ABIE53_003676	0.72	-1.1
4,133,620	-		ABIE53_003676	0.72	-0.5
4,133,620	-		ABIE53_003676	0.72	-0.8
4,133,620	-		ABIE53_003676	0.72	-1.2
4,133,620	-		ABIE53_003676	0.72	+1.0
4,133,620	-		ABIE53_003676	0.72	-2.6
4,133,620	-		ABIE53_003676	0.72	-0.8
4,133,620	-		ABIE53_003676	0.72	+0.1
4,133,626	+		ABIE53_003676	0.73	+1.2
4,133,626	+		ABIE53_003676	0.73	-0.2
4,133,626	+		ABIE53_003676	0.73	-0.1
4,133,626	+		ABIE53_003676	0.73	-0.3
4,133,626	+		ABIE53_003676	0.73	-1.2
4,133,627	-		ABIE53_003676	0.73	+0.9
4,133,627	-		ABIE53_003676	0.73	-0.1
4,133,633	+		ABIE53_003676	0.74	-0.3
4,133,633	+		ABIE53_003676	0.74	-0.4
4,133,633	+		ABIE53_003676	0.74	+0.4
4,133,633	+		ABIE53_003676	0.74	+1.3
4,133,633	+		ABIE53_003676	0.74	+0.0
4,133,633	+		ABIE53_003676	0.74	-0.7
4,133,633	+		ABIE53_003676	0.74	+1.0
4,133,633	+		ABIE53_003676	0.74	+0.1
4,133,633	+		ABIE53_003676	0.74	-1.2
4,133,633	+		ABIE53_003676	0.74	-0.9
4,133,633	+		ABIE53_003676	0.74	-0.2
4,133,634	-		ABIE53_003676	0.74	-0.4
4,133,634	-		ABIE53_003676	0.74	+1.9
4,133,634	-		ABIE53_003676	0.74	-0.4
4,133,634	-		ABIE53_003676	0.74	-0.8
4,133,634	-		ABIE53_003676	0.74	-0.7
4,133,637	+		ABIE53_003676	0.74	+2.3
4,133,637	+		ABIE53_003676	0.74	+2.7
4,133,637	+		ABIE53_003676	0.74	-1.4
4,133,637	+		ABIE53_003676	0.74	+1.4
4,133,637	+		ABIE53_003676	0.74	-0.3
4,133,637	+		ABIE53_003676	0.74	-0.0
4,133,637	+		ABIE53_003676	0.74	-1.3
4,133,637	+		ABIE53_003676	0.74	-0.9
4,133,637	+		ABIE53_003676	0.74	+0.3
4,133,637	+		ABIE53_003676	0.74	-0.8
4,133,637	+		ABIE53_003676	0.74	-0.6
4,133,637	+		ABIE53_003676	0.74	+2.7
4,133,637	+		ABIE53_003676	0.74	-0.1
4,133,637	+		ABIE53_003676	0.74	+0.6
4,133,637	+		ABIE53_003676	0.74	-1.3
4,133,638	-		ABIE53_003676	0.75	-1.4
4,133,638	-		ABIE53_003676	0.75	+1.5
4,133,638	-		ABIE53_003676	0.75	-0.7
4,133,638	-		ABIE53_003676	0.75	+0.4
4,133,638	-		ABIE53_003676	0.75	-0.0
4,133,638	-		ABIE53_003676	0.75	-0.1
4,133,638	-		ABIE53_003676	0.75	-0.2
4,133,638	-		ABIE53_003676	0.75	+1.3
4,133,730	+		ABIE53_003676	0.86	-0.6
4,133,730	+		ABIE53_003676	0.86	+0.5
4,133,730	+		ABIE53_003676	0.86	+0.8
4,133,730	+		ABIE53_003676	0.86	+0.9
4,133,730	+		ABIE53_003676	0.86	+1.5
4,133,730	+		ABIE53_003676	0.86	-0.5
4,133,731	-		ABIE53_003676	0.86	-1.0
4,133,731	-		ABIE53_003676	0.86	-0.9
4,133,731	-		ABIE53_003676	0.86	-0.6
4,133,731	-		ABIE53_003676	0.86	-1.2
4,133,731	-		ABIE53_003676	0.86	+0.3
4,133,731	-		ABIE53_003676	0.86	+1.0
4,133,731	-		ABIE53_003676	0.86	-1.0
4,133,731	-		ABIE53_003676	0.86	+0.3
4,133,788	+				+0.5
4,133,788	+				+0.1
4,133,789	-				-0.4
4,133,789	-				-1.2
4,133,909	+				-0.8
4,133,909	+				-1.1
4,133,909	+				-0.0
4,133,909	+				-0.7
4,133,909	+				-0.6
4,133,909	+				-0.4
4,133,909	+				+0.0
4,133,909	+				+3.5
4,133,909	+				+0.7
4,133,909	+				-0.5
4,133,910	-				+0.0
4,133,910	-				-0.6
4,133,910	-				+0.5
4,133,910	-				-0.5
4,133,910	-				+0.0
4,133,910	-				-1.6
4,133,910	-				+0.2
4,133,910	-				-0.3
4,133,910	-				+0.7
4,133,910	-				-0.6
4,133,910	-				-2.0
4,133,910	-				-0.2
4,133,925	+				+0.5
4,134,083	+				-0.5
4,134,083	+				-0.9
4,134,083	+				+0.3
4,134,083	+				-0.5
4,134,083	+				+0.3
4,134,083	+				+1.9
4,134,083	+				+0.7
4,134,083	+				+1.2
4,134,083	+				+2.7
4,134,083	+				-2.1
4,134,084	-				-1.4
4,134,084	-				-0.9
4,134,084	-				-1.6
4,134,084	-				-0.6
4,134,097	+				+0.9
4,134,097	+				-0.3
4,134,097	+				+0.5
4,134,097	+				+1.0
4,134,097	+				+1.4
4,134,097	+				-1.4
4,134,098	-				-2.4
4,134,098	-				+1.0
4,134,098	-				-1.6
4,134,098	-				+0.3
4,134,098	-				-0.5
4,134,098	-				-0.4
4,134,098	-				-1.0
4,134,098	-				-0.2
4,134,098	-				+1.2
4,134,098	-				-0.7
4,134,099	+				+1.2
4,134,099	+				-0.8
4,134,099	+				+0.3
4,134,099	+				-0.7
4,134,099	+				-0.7
4,134,099	+				+1.5
4,134,099	+				+0.4
4,134,100	-				-0.8
4,134,100	-				-1.4
4,134,182	+				+1.0
4,134,182	+				+1.9
4,134,182	+				+0.7
4,134,183	-				+0.2
4,134,183	-				-0.8
4,134,183	-				+0.8
4,134,186	+				-1.8
4,134,187	-				+0.4
4,134,232	+				+0.4
4,134,232	+				+0.0
4,134,232	+				-1.5
4,134,232	+				-1.4
4,134,232	+				-0.6
4,134,232	+				-1.2
4,134,232	+				-2.0
4,134,232	+				-0.2
4,134,232	+				+0.6
4,134,232	+				-1.2
4,134,232	+				-1.0
4,134,232	+				-0.3
4,134,233	-				-1.6
4,134,233	-				-0.9
4,134,233	-				+1.5
4,134,233	-				+0.3
4,134,233	-				-2.1
4,134,233	-				-1.4
4,134,233	-				+1.2
4,134,233	-				+1.3
4,134,251	+				+0.0
4,134,251	+				+0.5
4,134,256	+				-1.9
4,134,256	+				-1.4
4,134,444	+		ABIE53_003677	0.62	+0.9
4,134,444	+		ABIE53_003677	0.62	+3.9
4,134,445	-		ABIE53_003677	0.62	+0.2
4,134,445	-		ABIE53_003677	0.62	+0.2
4,134,555	+				-0.4
4,134,737	-				-1.0
4,134,826	+		ABIE53_003678	0.51	-0.6
4,134,826	+		ABIE53_003678	0.51	+0.9
4,134,826	+		ABIE53_003678	0.51	-1.2
4,134,827	-		ABIE53_003678	0.52	-1.5
4,134,827	-		ABIE53_003678	0.52	-1.0
4,134,827	-		ABIE53_003678	0.52	+0.3
4,134,827	-		ABIE53_003678	0.52	+0.5
4,134,914	+				-0.8
4,134,914	+				+1.5
4,134,914	+				+0.3
4,134,914	+				+0.2
4,134,914	+				-1.6
4,134,914	+				+1.5
4,134,914	+				-0.8
4,134,915	-				+1.9
4,134,915	-				+0.9
4,134,915	-				-2.0
4,134,915	-				-0.9
4,134,915	-				-2.1
4,134,915	-				+2.4
4,134,946	+				-0.4
4,134,946	+				+1.2
4,134,946	+				+0.7
4,134,946	+				-2.2
4,134,946	+				-0.6
4,134,946	+				-2.3
4,134,946	+				+1.4
4,134,946	+				-0.6
4,134,946	+				-2.2
4,134,946	+				-1.1
4,134,946	+				-1.2
4,134,946	+				+2.5
4,134,946	+				+0.9
4,134,946	+				-1.8
4,134,946	+				-0.2
4,134,947	-				-1.4
4,134,947	-				-2.2
4,134,947	-				-1.1
4,134,947	-				+1.2
4,134,947	-				-0.3
4,134,947	-				-2.1
4,134,947	-				-1.8
4,134,947	-				-2.6
4,134,947	-				-1.2
4,134,947	-				-0.1
4,134,947	-				-1.2
4,134,947	-				-0.1
4,134,948	+				-0.0
4,134,948	+				-0.6
4,134,948	+				+0.5
4,134,948	+				-0.6
4,134,948	+				-1.4
4,134,948	+				-0.1
4,134,948	+				-0.3
4,134,948	+				+1.5
4,134,948	+				-0.3
4,134,948	+				-0.0
4,134,948	+				-0.8
4,134,948	+				-0.2
4,134,948	+				+0.3
4,134,948	+				-1.3
4,134,948	+				-0.4
4,134,948	+				-0.1
4,134,948	+				-0.9
4,134,948	+				-2.3
4,134,948	+				-0.8
4,134,948	+				+2.5
4,134,948	+				-0.8
4,134,948	+				-0.8
4,134,948	+				+0.7
4,134,948	+				+0.3
4,134,948	+				-0.5
4,134,948	+				-1.5
4,134,948	+				+1.2
4,134,948	+				-1.4
4,134,948	+				-0.8
4,134,949	-				+0.5
4,134,949	-				-0.4
4,134,949	-				-2.3
4,134,949	-				-0.1
4,134,949	-				-0.3
4,134,949	-				-1.7
4,134,949	-				+0.9
4,134,949	-				+0.3
4,134,949	-				+0.3
4,134,949	-				-0.3
4,134,949	-				-0.5
4,134,949	-				+2.1
4,134,949	-				+0.2
4,134,949	-				+0.6
4,134,949	-				+1.3
4,134,949	-				-1.8
4,134,949	-				-0.5
4,134,949	-				+0.2
4,134,949	-				-0.6
4,134,949	-				-1.5
4,134,949	-				-1.7
4,134,949	-				-0.8
4,134,949	-				+1.9
4,134,949	-				-0.9
4,134,949	-				-1.3
4,134,949	-				+0.1
4,134,949	-				+2.5
4,134,949	-				-0.4
4,134,949	-				+0.0
4,134,949	-				-1.5
4,135,155	+				-0.1
4,135,155	+				-0.7
4,135,155	+				+2.0
4,135,156	-				-0.2
4,135,156	-				-1.3
4,135,218	+				+0.9
4,135,219	-				-0.4
4,135,219	-				-1.6
4,135,219	-				-1.0
4,135,219	-				+0.0
4,135,219	-				+2.9
4,135,257	+				+1.5
4,135,258	-				-0.2
4,135,258	-				+0.3
4,135,298	+				-0.3
4,135,298	+				+1.5
4,135,298	+				+0.3
4,135,298	+				+3.2
4,135,298	+				-1.7
4,135,299	-				+0.1
4,135,299	-				+0.2
4,135,299	-				+0.3
4,135,446	+				+0.2
4,135,446	+				-0.2
4,135,446	+				+0.5
4,135,447	-				-1.6
4,135,447	-				-1.9
4,135,447	-				-1.7
4,135,447	-				-0.6
4,135,545	+		ABIE53_003679	0.16	+0.2