Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2962
Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,734,387 | + | +1.0 | |||
3,734,395 | - | +1.3 | |||
3,734,395 | - | +1.4 | |||
3,734,467 | - | +2.4 | |||
3,734,484 | + | +0.8 | |||
3,734,500 | - | +0.0 | |||
3,734,628 | - | +4.1 | |||
3,734,664 | + | +2.7 | |||
3,734,664 | + | +2.7 | |||
3,734,664 | + | +2.2 | |||
3,734,672 | - | +2.4 | |||
3,734,672 | - | +2.9 | |||
3,734,832 | + | DvMF_2961 | 0.34 | +2.4 | |
3,734,875 | + | DvMF_2961 | 0.42 | +2.7 | |
3,735,045 | + | DvMF_2961 | 0.75 | +2.4 | |
3,735,152 | + | +2.5 | |||
3,735,627 | + | DvMF_2962 | 0.44 | -0.3 | |
3,735,723 | + | DvMF_2962 | 0.56 | +0.2 | |
3,735,788 | - | DvMF_2962 | 0.64 | -0.6 | |
3,735,949 | - | DvMF_2962 | 0.84 | -0.7 | |
3,736,121 | + | -0.9 | |||
3,736,754 | + | DvMF_2963 | 0.16 | +0.0 | |
3,736,783 | + | DvMF_2963 | 0.17 | -1.0 | |
3,737,026 | + | DvMF_2963 | 0.23 | -0.9 | |
3,737,058 | - | DvMF_2963 | 0.24 | -0.3 |
Or see this region's nucleotide sequence