Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2657

Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2655 and DvMF_2656 are separated by 274 nucleotidesDvMF_2656 and DvMF_2657 are separated by 131 nucleotidesDvMF_2657 and DvMF_2658 are separated by 58 nucleotides DvMF_2655: DvMF_2655 - hypothetical protein (RefSeq), at 3,355,152 to 3,355,688 _2655 DvMF_2656: DvMF_2656 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 3,355,963 to 3,356,385 _2656 DvMF_2657: DvMF_2657 - Serine O-acetyltransferase (RefSeq), at 3,356,517 to 3,357,470 _2657 DvMF_2658: DvMF_2658 - cysteine synthase (RefSeq), at 3,357,529 to 3,358,461 _2658 Position (kb) 3356 3357 3358Strain fitness (log2 ratio) -1 0 1at 3355.692 kb on + strandat 3356.140 kb on + strand, within DvMF_2656at 3356.166 kb on + strand, within DvMF_2656at 3356.357 kb on - strandat 3356.434 kb on + strandat 3356.553 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
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3,355,692 + -0.3
3,356,140 + DvMF_2656 0.42 -0.2
3,356,166 + DvMF_2656 0.48 -0.6
3,356,357 - -0.4
3,356,434 + -0.4
3,356,553 - -1.6

Or see this region's nucleotide sequence