Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2201 and DvMF_2202 are separated by 3 nucleotides DvMF_2202 and DvMF_2203 are separated by 2 nucleotides DvMF_2203 and DvMF_2204 are separated by 188 nucleotides
DvMF_2201: DvMF_2201 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,754,115 to 2,755,557
_2201
DvMF_2202: DvMF_2202 - Glucose-6-phosphate isomerase (RefSeq), at 2,755,561 to 2,756,922
_2202
DvMF_2203: DvMF_2203 - hypothetical protein (RefSeq), at 2,756,925 to 2,757,218
_2203
DvMF_2204: DvMF_2204 - aminotransferase class I and II (RefSeq), at 2,757,407 to 2,758,579
_2204
Position (kb)
2755
2756
2757 Strain fitness (log2 ratio)
-2
-1
0
1 at 2756.924 kb on + strand at 2756.924 kb on + strand at 2757.132 kb on + strand, within DvMF_2203 at 2757.152 kb on - strand, within DvMF_2203 at 2757.263 kb on - strand at 2757.439 kb on + strand at 2757.530 kb on + strand, within DvMF_2204 at 2757.533 kb on - strand, within DvMF_2204 at 2757.582 kb on - strand, within DvMF_2204 at 2757.582 kb on - strand, within DvMF_2204 at 2757.618 kb on - strand, within DvMF_2204 at 2757.646 kb on - strand, within DvMF_2204 at 2757.830 kb on - strand, within DvMF_2204 at 2757.833 kb on + strand, within DvMF_2204 at 2757.866 kb on + strand, within DvMF_2204 at 2757.866 kb on + strand, within DvMF_2204 at 2757.866 kb on + strand, within DvMF_2204 at 2757.867 kb on + strand, within DvMF_2204 at 2757.875 kb on - strand, within DvMF_2204
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml remove 2,756,924 + -1.8 2,756,924 + -2.0 2,757,132 + DvMF_2203 0.70 -0.4 2,757,152 - DvMF_2203 0.77 -0.6 2,757,263 - -0.7 2,757,439 + -0.8 2,757,530 + DvMF_2204 0.10 -2.0 2,757,533 - DvMF_2204 0.11 -0.8 2,757,582 - DvMF_2204 0.15 -1.2 2,757,582 - DvMF_2204 0.15 -1.1 2,757,618 - DvMF_2204 0.18 -1.7 2,757,646 - DvMF_2204 0.20 -1.2 2,757,830 - DvMF_2204 0.36 -0.4 2,757,833 + DvMF_2204 0.36 +0.3 2,757,866 + DvMF_2204 0.39 -1.5 2,757,866 + DvMF_2204 0.39 -1.7 2,757,866 + DvMF_2204 0.39 -1.4 2,757,867 + DvMF_2204 0.39 -2.0 2,757,875 - DvMF_2204 0.40 -1.3
Or see this region's nucleotide sequence