Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1527
Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,880,909 | - | DvMF_1526 | 0.40 | -1.1 | |
1,881,126 | - | DvMF_1526 | 0.57 | -0.5 | |
1,881,172 | + | DvMF_1526 | 0.61 | -0.0 | |
1,881,179 | + | DvMF_1526 | 0.61 | +0.5 | |
1,881,378 | - | DvMF_1526 | 0.77 | -2.1 | |
1,881,392 | - | DvMF_1526 | 0.78 | +1.1 | |
1,881,402 | - | DvMF_1526 | 0.79 | -1.6 | |
1,881,949 | + | DvMF_1527 | 0.10 | -1.6 | |
1,882,070 | + | DvMF_1527 | 0.24 | +0.2 | |
1,882,234 | + | DvMF_1527 | 0.44 | +0.2 | |
1,882,403 | - | DvMF_1527 | 0.63 | -0.0 | |
1,882,462 | - | DvMF_1527 | 0.70 | +0.3 | |
1,883,307 | - | -2.0 | |||
1,883,422 | - | DvMF_1528 | 0.14 | -2.2 | |
1,883,587 | - | DvMF_1528 | 0.25 | +0.0 | |
1,883,594 | + | DvMF_1528 | 0.25 | -2.3 | |
1,883,662 | + | DvMF_1528 | 0.30 | -2.1 | |
1,883,670 | - | DvMF_1528 | 0.30 | -1.0 |
Or see this region's nucleotide sequence