Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1440
Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,760,750 | + | -0.8 | |||
1,760,893 | - | -0.3 | |||
1,761,149 | + | +0.5 | |||
1,761,293 | + | DvMF_1439 | 0.23 | -0.7 | |
1,761,301 | - | DvMF_1439 | 0.24 | +0.1 | |
1,761,341 | - | DvMF_1439 | 0.31 | +0.4 | |
1,761,420 | + | DvMF_1439 | 0.45 | -0.6 | |
1,761,522 | - | DvMF_1439 | 0.63 | -0.2 | |
1,761,707 | - | +0.2 | |||
1,761,723 | + | -0.6 | |||
1,761,723 | + | +0.3 | |||
1,761,801 | - | +0.5 | |||
1,761,811 | - | -0.8 | |||
1,761,817 | + | +0.3 | |||
1,761,850 | + | DvMF_1440 | 0.11 | +0.4 | |
1,761,970 | - | DvMF_1440 | 0.23 | +0.4 | |
1,762,063 | - | DvMF_1440 | 0.32 | +0.5 | |
1,762,248 | - | DvMF_1440 | 0.50 | +0.4 | |
1,762,258 | + | DvMF_1440 | 0.51 | +0.7 | |
1,762,258 | + | DvMF_1440 | 0.51 | +0.4 | |
1,762,266 | - | DvMF_1440 | 0.52 | -0.0 | |
1,762,336 | - | DvMF_1440 | 0.59 | +0.6 | |
1,762,428 | - | DvMF_1440 | 0.68 | +0.4 | |
1,762,594 | + | DvMF_1440 | 0.84 | -0.4 | |
1,762,869 | + | -0.1 | |||
1,762,961 | - | +0.5 | |||
1,763,293 | + | DvMF_1441 | 0.50 | +0.9 | |
1,763,293 | + | DvMF_1441 | 0.50 | +0.6 | |
1,763,301 | - | DvMF_1441 | 0.51 | +0.3 | |
1,763,313 | + | DvMF_1441 | 0.52 | +1.0 | |
1,763,572 | + | DvMF_1441 | 0.83 | +0.4 | |
1,763,707 | - | +0.3 |
Or see this region's nucleotide sequence