Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1190 and DvMF_1191 are separated by 54 nucleotides DvMF_1191 and DvMF_1192 are separated by 204 nucleotides DvMF_1192 and DvMF_1193 are separated by 42 nucleotides
DvMF_1190: DvMF_1190 - protein of unknown function DUF178 (RefSeq), at 1,468,824 to 1,469,678
_1190
DvMF_1191: DvMF_1191 - hypothetical protein (RefSeq), at 1,469,733 to 1,470,872
_1191
DvMF_1192: DvMF_1192 - hypothetical protein (RefSeq), at 1,471,077 to 1,471,262
_1192
DvMF_1193: DvMF_1193 - protein of unknown function DUF6 transmembrane (RefSeq), at 1,471,305 to 1,472,309
_1193
Position (kb)
1469
1470
1471 Strain fitness (log2 ratio)
-1
0
1 at 1468.750 kb on - strand at 1469.775 kb on - strand at 1469.775 kb on - strand at 1469.859 kb on + strand, within DvMF_1191 at 1469.859 kb on + strand, within DvMF_1191 at 1469.867 kb on - strand, within DvMF_1191 at 1469.881 kb on + strand, within DvMF_1191 at 1469.914 kb on + strand, within DvMF_1191 at 1469.930 kb on - strand, within DvMF_1191 at 1469.931 kb on - strand, within DvMF_1191 at 1469.931 kb on - strand, within DvMF_1191 at 1469.954 kb on - strand, within DvMF_1191 at 1470.521 kb on + strand, within DvMF_1191 at 1470.572 kb on - strand, within DvMF_1191 at 1470.613 kb on - strand, within DvMF_1191 at 1470.734 kb on + strand, within DvMF_1191 at 1470.742 kb on - strand, within DvMF_1191 at 1471.219 kb on + strand, within DvMF_1192 at 1471.452 kb on + strand, within DvMF_1193 at 1471.561 kb on + strand, within DvMF_1193 at 1471.564 kb on - strand, within DvMF_1193 at 1471.766 kb on + strand, within DvMF_1193 at 1471.777 kb on + strand, within DvMF_1193 at 1471.777 kb on + strand, within DvMF_1193 at 1471.790 kb on - strand, within DvMF_1193 at 1471.855 kb on + strand, within DvMF_1193
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml remove 1,468,750 - -0.4 1,469,775 - -0.6 1,469,775 - -1.6 1,469,859 + DvMF_1191 0.11 -0.3 1,469,859 + DvMF_1191 0.11 -0.5 1,469,867 - DvMF_1191 0.12 -1.1 1,469,881 + DvMF_1191 0.13 -0.2 1,469,914 + DvMF_1191 0.16 +0.2 1,469,930 - DvMF_1191 0.17 -0.5 1,469,931 - DvMF_1191 0.17 -0.4 1,469,931 - DvMF_1191 0.17 -0.2 1,469,954 - DvMF_1191 0.19 +0.4 1,470,521 + DvMF_1191 0.69 -0.6 1,470,572 - DvMF_1191 0.74 -0.3 1,470,613 - DvMF_1191 0.77 -0.7 1,470,734 + DvMF_1191 0.88 +0.9 1,470,742 - DvMF_1191 0.89 -0.5 1,471,219 + DvMF_1192 0.76 -1.1 1,471,452 + DvMF_1193 0.15 -0.3 1,471,561 + DvMF_1193 0.25 +0.2 1,471,564 - DvMF_1193 0.26 -0.3 1,471,766 + DvMF_1193 0.46 -1.0 1,471,777 + DvMF_1193 0.47 -0.1 1,471,777 + DvMF_1193 0.47 -0.4 1,471,790 - DvMF_1193 0.48 -0.9 1,471,855 + DvMF_1193 0.55 -1.3
Or see this region's nucleotide sequence