Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0788 and DvMF_0789 are separated by 278 nucleotides DvMF_0789 and DvMF_0790 are separated by 206 nucleotides DvMF_0790 and DvMF_0791 are separated by 181 nucleotides
DvMF_0788: DvMF_0788 - extracellular solute-binding protein family 5 (RefSeq), at 947,079 to 948,809
_0788
DvMF_0789: DvMF_0789 - Non-specific serine/threonine protein kinase (RefSeq), at 949,088 to 952,297
_0789
DvMF_0790: DvMF_0790 - hypothetical protein (RefSeq), at 952,504 to 952,866
_0790
DvMF_0791: DvMF_0791 - no description, at 953,048 to 954,794
_0791
Position (kb) 949
950
951
952
953 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 948.111 kb on + strand, within DvMF_0788 at 948.234 kb on - strand, within DvMF_0788 at 948.250 kb on - strand, within DvMF_0788 at 948.311 kb on - strand, within DvMF_0788 at 948.334 kb on - strand, within DvMF_0788 at 948.409 kb on - strand, within DvMF_0788 at 948.463 kb on + strand, within DvMF_0788 at 948.465 kb on + strand, within DvMF_0788 at 948.767 kb on - strand at 948.767 kb on - strand at 948.829 kb on + strand at 951.652 kb on + strand, within DvMF_0789 at 952.294 kb on + strand at 952.364 kb on - strand at 952.479 kb on + strand at 952.638 kb on + strand, within DvMF_0790 at 952.639 kb on + strand, within DvMF_0790 at 953.045 kb on + strand at 953.091 kb on - strand at 953.144 kb on - strand at 953.160 kb on + strand at 953.160 kb on + strand at 953.160 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml remove 948,111 + DvMF_0788 0.60 -1.9 948,234 - DvMF_0788 0.67 -3.1 948,250 - DvMF_0788 0.68 -2.4 948,311 - DvMF_0788 0.71 -2.7 948,334 - DvMF_0788 0.73 -2.6 948,409 - DvMF_0788 0.77 -2.7 948,463 + DvMF_0788 0.80 -2.3 948,465 + DvMF_0788 0.80 -2.3 948,767 - -1.9 948,767 - -0.8 948,829 + -0.1 951,652 + DvMF_0789 0.80 -2.5 952,294 + +0.1 952,364 - -0.1 952,479 + -0.2 952,638 + DvMF_0790 0.37 +0.1 952,639 + DvMF_0790 0.37 +0.3 953,045 + -0.8 953,091 - -0.2 953,144 - -0.3 953,160 + -0.5 953,160 + +0.5 953,160 + -1.3
Or see this region's nucleotide sequence