Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0661 and DvMF_0662 are separated by 86 nucleotides DvMF_0662 and DvMF_0663 are separated by 61 nucleotides
DvMF_0661: DvMF_0661 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 796,854 to 798,914
_0661
DvMF_0662: DvMF_0662 - Coenzyme F390 synthetase-like protein (RefSeq), at 799,001 to 800,278
_0662
DvMF_0663: DvMF_0663 - Uncharacterized protein involved in methicillin resistance-like protein (RefSeq), at 800,340 to 801,338
_0663
Position (kb) 799
800
801 Strain fitness (log2 ratio) -2
-1
0
1 at 798.238 kb on + strand, within DvMF_0661 at 798.266 kb on + strand, within DvMF_0661 at 798.274 kb on - strand, within DvMF_0661 at 798.320 kb on - strand, within DvMF_0661 at 798.353 kb on + strand, within DvMF_0661 at 798.435 kb on - strand, within DvMF_0661 at 798.450 kb on - strand, within DvMF_0661 at 798.507 kb on + strand, within DvMF_0661 at 798.807 kb on - strand at 798.833 kb on - strand at 798.940 kb on - strand at 799.039 kb on - strand at 799.182 kb on - strand, within DvMF_0662 at 799.561 kb on - strand, within DvMF_0662 at 799.672 kb on + strand, within DvMF_0662 at 799.715 kb on - strand, within DvMF_0662 at 799.720 kb on + strand, within DvMF_0662 at 799.755 kb on + strand, within DvMF_0662 at 800.061 kb on - strand, within DvMF_0662 at 800.745 kb on + strand, within DvMF_0663 at 800.827 kb on - strand, within DvMF_0663 at 800.923 kb on + strand, within DvMF_0663 at 801.089 kb on + strand, within DvMF_0663 at 801.199 kb on - strand, within DvMF_0663 at 801.275 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml remove 798,238 + DvMF_0661 0.67 +0.8 798,266 + DvMF_0661 0.69 -0.3 798,274 - DvMF_0661 0.69 +0.4 798,320 - DvMF_0661 0.71 -0.5 798,353 + DvMF_0661 0.73 +0.2 798,435 - DvMF_0661 0.77 -0.6 798,450 - DvMF_0661 0.77 -0.4 798,507 + DvMF_0661 0.80 -0.3 798,807 - -0.6 798,833 - -2.6 798,940 - +0.1 799,039 - -0.9 799,182 - DvMF_0662 0.14 +0.1 799,561 - DvMF_0662 0.44 +0.2 799,672 + DvMF_0662 0.53 -0.3 799,715 - DvMF_0662 0.56 -0.6 799,720 + DvMF_0662 0.56 +0.3 799,755 + DvMF_0662 0.59 -0.5 800,061 - DvMF_0662 0.83 +0.4 800,745 + DvMF_0663 0.41 -0.5 800,827 - DvMF_0663 0.49 -0.2 800,923 + DvMF_0663 0.58 -0.4 801,089 + DvMF_0663 0.75 -0.5 801,199 - DvMF_0663 0.86 -0.0 801,275 - -1.0
Or see this region's nucleotide sequence