Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0470 and DvMF_0471 are separated by 410 nucleotides DvMF_0471 and DvMF_0472 are separated by 9 nucleotides
DvMF_0470: DvMF_0470 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 550,733 to 552,838
_0470
DvMF_0471: DvMF_0471 - DNA repair protein RadA (RefSeq), at 553,249 to 554,727
_0471
DvMF_0472: DvMF_0472 - hypothetical protein (RefSeq), at 554,737 to 555,705
_0472
Position (kb) 553
554
555 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 552.277 kb on + strand, within DvMF_0470 at 552.303 kb on - strand, within DvMF_0470 at 552.590 kb on - strand, within DvMF_0470 at 552.591 kb on + strand, within DvMF_0470 at 552.706 kb on + strand at 552.779 kb on + strand at 552.865 kb on + strand at 553.019 kb on + strand at 553.074 kb on + strand at 553.544 kb on + strand at 553.852 kb on - strand, within DvMF_0471 at 553.862 kb on - strand, within DvMF_0471 at 553.883 kb on + strand, within DvMF_0471 at 553.987 kb on - strand, within DvMF_0471 at 554.171 kb on + strand, within DvMF_0471 at 554.525 kb on - strand, within DvMF_0471 at 554.613 kb on - strand at 554.628 kb on + strand at 554.628 kb on + strand at 554.628 kb on + strand at 554.636 kb on - strand at 554.827 kb on - strand at 554.847 kb on - strand, within DvMF_0472 at 555.112 kb on + strand, within DvMF_0472 at 555.227 kb on - strand, within DvMF_0472 at 555.255 kb on + strand, within DvMF_0472 at 555.315 kb on - strand, within DvMF_0472 at 555.464 kb on + strand, within DvMF_0472 at 555.619 kb on - strand at 555.619 kb on - strand at 555.631 kb on - strand at 555.666 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml remove 552,277 + DvMF_0470 0.73 -0.5 552,303 - DvMF_0470 0.75 -0.5 552,590 - DvMF_0470 0.88 -0.2 552,591 + DvMF_0470 0.88 -0.7 552,706 + -0.7 552,779 + -0.4 552,865 + +0.0 553,019 + -0.3 553,074 + +0.5 553,544 + +2.4 553,852 - DvMF_0471 0.41 -0.6 553,862 - DvMF_0471 0.41 -1.0 553,883 + DvMF_0471 0.43 -0.3 553,987 - DvMF_0471 0.50 -4.6 554,171 + DvMF_0471 0.62 -1.5 554,525 - DvMF_0471 0.86 -1.1 554,613 - -0.7 554,628 + -0.1 554,628 + -0.5 554,628 + -0.4 554,636 - -0.9 554,827 - -2.3 554,847 - DvMF_0472 0.11 -1.6 555,112 + DvMF_0472 0.39 -2.3 555,227 - DvMF_0472 0.51 -1.1 555,255 + DvMF_0472 0.53 -1.0 555,315 - DvMF_0472 0.60 -0.4 555,464 + DvMF_0472 0.75 -0.4 555,619 - -2.4 555,619 - -1.2 555,631 - +0.2 555,666 + -1.2
Or see this region's nucleotide sequence