Experiment: MoYLS4 with Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0235 and DvMF_0236 are separated by 219 nucleotides DvMF_0236 and DvMF_0237 are separated by 425 nucleotides
DvMF_0235: DvMF_0235 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 262,238 to 262,888
_0235
DvMF_0236: DvMF_0236 - peptidase M16 domain protein (RefSeq), at 263,108 to 265,921
_0236
DvMF_0237: DvMF_0237 - putative CheA signal transduction histidine kinase (RefSeq), at 266,347 to 268,356
_0237
Position (kb) 263
264
265
266 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 262.308 kb on + strand, within DvMF_0235 at 262.527 kb on + strand, within DvMF_0235 at 262.670 kb on + strand, within DvMF_0235 at 262.963 kb on - strand at 263.007 kb on + strand at 263.014 kb on + strand at 263.114 kb on - strand at 263.196 kb on - strand at 263.554 kb on + strand, within DvMF_0236 at 263.718 kb on - strand, within DvMF_0236 at 263.739 kb on + strand, within DvMF_0236 at 263.806 kb on + strand, within DvMF_0236 at 263.822 kb on + strand, within DvMF_0236 at 263.843 kb on + strand, within DvMF_0236 at 263.910 kb on + strand, within DvMF_0236 at 264.299 kb on - strand, within DvMF_0236 at 264.494 kb on - strand, within DvMF_0236 at 264.738 kb on - strand, within DvMF_0236 at 265.407 kb on - strand, within DvMF_0236 at 265.676 kb on + strand at 265.676 kb on + strand at 265.903 kb on + strand at 266.177 kb on + strand at 266.345 kb on - strand at 266.447 kb on + strand at 266.465 kb on - strand at 266.787 kb on + strand, within DvMF_0237 at 266.892 kb on + strand, within DvMF_0237
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.1 mg/ml remove 262,308 + DvMF_0235 0.11 -1.0 262,527 + DvMF_0235 0.44 -0.1 262,670 + DvMF_0235 0.66 -0.5 262,963 - -0.5 263,007 + -0.4 263,014 + -0.8 263,114 - -0.2 263,196 - -3.3 263,554 + DvMF_0236 0.16 -3.4 263,718 - DvMF_0236 0.22 -3.9 263,739 + DvMF_0236 0.22 -3.2 263,806 + DvMF_0236 0.25 -4.4 263,822 + DvMF_0236 0.25 -4.2 263,843 + DvMF_0236 0.26 -2.8 263,910 + DvMF_0236 0.29 -3.6 264,299 - DvMF_0236 0.42 -4.6 264,494 - DvMF_0236 0.49 -4.3 264,738 - DvMF_0236 0.58 -4.4 265,407 - DvMF_0236 0.82 -3.4 265,676 + -5.4 265,676 + -2.0 265,903 + -4.9 266,177 + -0.1 266,345 - +0.5 266,447 + -0.7 266,465 - -0.2 266,787 + DvMF_0237 0.22 -0.5 266,892 + DvMF_0237 0.27 +0.3
Or see this region's nucleotide sequence