Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0668 and Shew_0669 are separated by 101 nucleotides Shew_0669 and Shew_0670 are separated by 116 nucleotides Shew_0670 and Shew_0671 are separated by 44 nucleotides
Shew_0668: Shew_0668 - hypothetical protein (RefSeq), at 760,155 to 761,870
_0668
Shew_0669: Shew_0669 - redoxin domain-containing protein (RefSeq), at 761,972 to 762,502
_0669
Shew_0670: Shew_0670 - hypothetical protein (RefSeq), at 762,619 to 764,085
_0670
Shew_0671: Shew_0671 - phospholipase A(1) (RefSeq), at 764,130 to 765,056
_0671
Position (kb) 762
763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 761.806 kb on - strand at 761.853 kb on - strand at 761.858 kb on - strand at 762.071 kb on + strand, within Shew_0669 at 762.243 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.864 kb on + strand, within Shew_0670 at 762.872 kb on - strand, within Shew_0670 at 762.872 kb on - strand, within Shew_0670 at 762.886 kb on - strand, within Shew_0670 at 763.047 kb on + strand, within Shew_0670 at 763.055 kb on - strand, within Shew_0670 at 763.092 kb on + strand, within Shew_0670 at 763.111 kb on + strand, within Shew_0670 at 763.119 kb on - strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.148 kb on - strand, within Shew_0670 at 763.378 kb on + strand, within Shew_0670 at 763.396 kb on - strand, within Shew_0670 at 763.438 kb on + strand, within Shew_0670 at 763.633 kb on - strand, within Shew_0670 at 763.749 kb on + strand, within Shew_0670 at 763.850 kb on + strand, within Shew_0670 at 763.935 kb on + strand, within Shew_0670 at 764.027 kb on - strand at 764.470 kb on - strand, within Shew_0671 at 764.536 kb on + strand, within Shew_0671 at 764.667 kb on + strand, within Shew_0671 at 764.758 kb on - strand, within Shew_0671 at 764.908 kb on - strand, within Shew_0671 at 764.952 kb on - strand, within Shew_0671
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 761,806 - +0.1 761,853 - -0.3 761,858 - +0.5 762,071 + Shew_0669 0.19 -0.6 762,243 + Shew_0669 0.51 -1.2 762,438 + Shew_0669 0.88 +0.1 762,438 + Shew_0669 0.88 +0.6 762,438 + Shew_0669 0.88 -0.1 762,864 + Shew_0670 0.17 +1.2 762,872 - Shew_0670 0.17 -0.4 762,872 - Shew_0670 0.17 +0.7 762,886 - Shew_0670 0.18 -1.3 763,047 + Shew_0670 0.29 +0.2 763,055 - Shew_0670 0.30 +2.4 763,092 + Shew_0670 0.32 +0.9 763,111 + Shew_0670 0.34 +0.1 763,119 - Shew_0670 0.34 +0.4 763,140 + Shew_0670 0.36 +0.5 763,140 + Shew_0670 0.36 +0.0 763,148 - Shew_0670 0.36 +1.2 763,378 + Shew_0670 0.52 -0.9 763,396 - Shew_0670 0.53 -2.6 763,438 + Shew_0670 0.56 +1.1 763,633 - Shew_0670 0.69 -1.5 763,749 + Shew_0670 0.77 +0.1 763,850 + Shew_0670 0.84 +0.8 763,935 + Shew_0670 0.90 +0.5 764,027 - +2.0 764,470 - Shew_0671 0.37 -3.2 764,536 + Shew_0671 0.44 +0.4 764,667 + Shew_0671 0.58 +0.3 764,758 - Shew_0671 0.68 +0.9 764,908 - Shew_0671 0.84 -0.9 764,952 - Shew_0671 0.89 +0.2
Or see this region's nucleotide sequence