Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0524 and Shew_0525 are separated by 73 nucleotides Shew_0525 and Shew_0526 are separated by 31 nucleotides Shew_0526 and Shew_0527 are separated by 42 nucleotides Shew_0527 and Shew_0528 are separated by 94 nucleotides
Shew_0524: Shew_0524 - cytochrome c, class I (RefSeq), at 594,644 to 595,705
_0524
Shew_0525: Shew_0525 - hypothetical protein (RefSeq), at 595,779 to 596,003
_0525
Shew_0526: Shew_0526 - hypothetical protein (RefSeq), at 596,035 to 596,406
_0526
Shew_0527: Shew_0527 - Sel1 domain-containing protein (RefSeq), at 596,449 to 597,303
_0527
Shew_0528: Shew_0528 - Sel1 domain-containing protein (RefSeq), at 597,398 to 598,222
_0528
Position (kb) 596
597 Strain fitness (log2 ratio) -2
-1
0
1 at 595.132 kb on + strand, within Shew_0524 at 595.177 kb on + strand, within Shew_0524 at 595.378 kb on - strand, within Shew_0524 at 595.388 kb on + strand, within Shew_0524 at 595.488 kb on - strand, within Shew_0524 at 595.492 kb on + strand, within Shew_0524 at 595.492 kb on + strand, within Shew_0524 at 595.492 kb on + strand, within Shew_0524 at 595.500 kb on - strand, within Shew_0524 at 595.500 kb on + strand, within Shew_0524 at 595.500 kb on - strand, within Shew_0524 at 595.530 kb on - strand, within Shew_0524 at 595.708 kb on - strand at 595.727 kb on - strand at 595.762 kb on - strand at 596.090 kb on + strand, within Shew_0526 at 596.151 kb on + strand, within Shew_0526 at 596.273 kb on + strand, within Shew_0526 at 596.376 kb on + strand at 596.464 kb on + strand at 596.543 kb on + strand, within Shew_0527 at 596.690 kb on - strand, within Shew_0527 at 596.791 kb on - strand, within Shew_0527 at 596.801 kb on - strand, within Shew_0527 at 596.891 kb on - strand, within Shew_0527 at 596.917 kb on - strand, within Shew_0527 at 597.029 kb on + strand, within Shew_0527 at 597.029 kb on + strand, within Shew_0527 at 597.226 kb on - strand at 597.236 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 595,132 + Shew_0524 0.46 +0.0 595,177 + Shew_0524 0.50 +0.3 595,378 - Shew_0524 0.69 -0.9 595,388 + Shew_0524 0.70 +0.3 595,488 - Shew_0524 0.79 +0.8 595,492 + Shew_0524 0.80 +0.4 595,492 + Shew_0524 0.80 -0.8 595,492 + Shew_0524 0.80 -0.5 595,500 - Shew_0524 0.81 +0.3 595,500 + Shew_0524 0.81 -1.2 595,500 - Shew_0524 0.81 +0.5 595,530 - Shew_0524 0.83 +0.1 595,708 - -0.0 595,727 - +0.2 595,762 - +0.2 596,090 + Shew_0526 0.15 +1.6 596,151 + Shew_0526 0.31 +0.6 596,273 + Shew_0526 0.64 -1.8 596,376 + +0.3 596,464 + -0.1 596,543 + Shew_0527 0.11 -0.2 596,690 - Shew_0527 0.28 +0.7 596,791 - Shew_0527 0.40 +0.3 596,801 - Shew_0527 0.41 +1.0 596,891 - Shew_0527 0.52 +0.6 596,917 - Shew_0527 0.55 -1.5 597,029 + Shew_0527 0.68 +0.0 597,029 + Shew_0527 0.68 +0.4 597,226 - -1.4 597,236 + +0.7
Or see this region's nucleotide sequence