Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0248 and Shew_0249 are separated by 455 nucleotides Shew_0249 and Shew_0250 are separated by 10 nucleotides
Shew_0248: Shew_0248 - GCN5-related N-acetyltransferase (RefSeq), at 267,039 to 267,596
_0248
Shew_0249: Shew_0249 - GCN5-related N-acetyltransferase (RefSeq), at 268,052 to 268,594
_0249
Shew_0250: Shew_0250 - MerR family transcriptional regulator (RefSeq), at 268,605 to 269,783
_0250
Position (kb) 268
269 Strain fitness (log2 ratio) -2
-1
0
1
2 at 267.192 kb on - strand, within Shew_0248 at 267.285 kb on - strand, within Shew_0248 at 267.287 kb on + strand, within Shew_0248 at 267.295 kb on - strand, within Shew_0248 at 267.295 kb on - strand, within Shew_0248 at 267.369 kb on + strand, within Shew_0248 at 267.371 kb on - strand, within Shew_0248 at 267.418 kb on + strand, within Shew_0248 at 267.592 kb on - strand at 267.607 kb on - strand at 267.913 kb on + strand at 267.932 kb on - strand at 268.026 kb on + strand at 268.110 kb on - strand, within Shew_0249 at 268.171 kb on - strand, within Shew_0249 at 268.342 kb on - strand, within Shew_0249 at 268.507 kb on + strand, within Shew_0249 at 268.718 kb on - strand at 268.740 kb on + strand, within Shew_0250 at 268.751 kb on - strand, within Shew_0250 at 268.826 kb on + strand, within Shew_0250 at 268.996 kb on - strand, within Shew_0250 at 269.180 kb on + strand, within Shew_0250 at 269.334 kb on + strand, within Shew_0250 at 269.413 kb on - strand, within Shew_0250 at 269.423 kb on - strand, within Shew_0250 at 269.423 kb on - strand, within Shew_0250
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 267,192 - Shew_0248 0.27 -1.5 267,285 - Shew_0248 0.44 -0.4 267,287 + Shew_0248 0.44 -0.3 267,295 - Shew_0248 0.46 -1.0 267,295 - Shew_0248 0.46 +0.4 267,369 + Shew_0248 0.59 +0.7 267,371 - Shew_0248 0.59 -1.9 267,418 + Shew_0248 0.68 +0.5 267,592 - -2.4 267,607 - +0.5 267,913 + -0.7 267,932 - -0.9 268,026 + +0.3 268,110 - Shew_0249 0.11 -0.0 268,171 - Shew_0249 0.22 +1.7 268,342 - Shew_0249 0.53 +0.3 268,507 + Shew_0249 0.84 +0.6 268,718 - +0.8 268,740 + Shew_0250 0.11 +0.2 268,751 - Shew_0250 0.12 +0.2 268,826 + Shew_0250 0.19 +1.0 268,996 - Shew_0250 0.33 +2.5 269,180 + Shew_0250 0.49 -1.2 269,334 + Shew_0250 0.62 +0.8 269,413 - Shew_0250 0.69 -1.0 269,423 - Shew_0250 0.69 +0.3 269,423 - Shew_0250 0.69 +0.0
Or see this region's nucleotide sequence