Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03319

Experiment: PYE pH6 copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE pH6 copy B
3,496,945	+		CCNA_03318	0.41	+0.2
3,496,953	-		CCNA_03318	0.42	+1.6
3,496,960	+		CCNA_03318	0.43	-0.6
3,497,001	-		CCNA_03318	0.46	+2.0
3,497,031	-		CCNA_03318	0.48	-0.3
3,497,036	+		CCNA_03318	0.48	-1.4
3,497,044	-		CCNA_03318	0.49	-0.2
3,497,094	-		CCNA_03318	0.52	-1.0
3,497,098	+		CCNA_03318	0.53	-0.1
3,497,103	+		CCNA_03318	0.53	+1.1
3,497,103	+		CCNA_03318	0.53	-0.6
3,497,103	+		CCNA_03318	0.53	+0.2
3,497,106	-		CCNA_03318	0.53	-1.2
3,497,108	+		CCNA_03318	0.53	+0.4
3,497,111	-		CCNA_03318	0.54	-0.6
3,497,111	-		CCNA_03318	0.54	+0.3
3,497,111	-		CCNA_03318	0.54	-0.8
3,497,136	-		CCNA_03318	0.55	+0.7
3,497,141	+		CCNA_03318	0.56	+1.8
3,497,147	-		CCNA_03318	0.56	-1.3
3,497,177	+		CCNA_03318	0.58	-0.1
3,497,182	+		CCNA_03318	0.59	-0.7
3,497,216	-		CCNA_03318	0.61	-0.1
3,497,216	-		CCNA_03318	0.61	-2.5
3,497,263	+		CCNA_03318	0.65	+0.0
3,497,298	+		CCNA_03318	0.67	-0.9
3,497,306	-		CCNA_03318	0.68	-0.5
3,497,317	-		CCNA_03318	0.68	-0.0
3,497,319	+		CCNA_03318	0.69	+1.8
3,497,351	-		CCNA_03318	0.71	+0.4
3,497,364	+		CCNA_03318	0.72	+0.9
3,497,372	-		CCNA_03318	0.72	-0.1
3,497,432	-		CCNA_03318	0.77	+0.3
3,497,442	-		CCNA_03318	0.78	+0.5
3,497,451	+		CCNA_03318	0.78	+0.0
3,497,459	-		CCNA_03318	0.79	+0.4
3,497,551	+		CCNA_03318	0.85	+0.4
3,497,577	+		CCNA_03318	0.87	+0.1
3,497,645	-				+1.6
3,497,649	+				-0.4
3,497,649	+				+0.9
3,497,655	-				+0.7
3,497,657	-				+0.4
3,497,657	-				+0.7
3,497,705	-				+0.4
3,497,708	+				+0.4
3,497,708	+				+0.6
3,497,709	+				+1.0
3,497,746	+				+0.0
3,497,748	+				+2.3
3,497,754	-				-0.9
3,497,754	-				+1.4
3,497,811	+				+0.5
3,497,817	+				+3.7
3,497,825	-				+0.3
3,497,863	+				+0.4
3,497,916	+				-0.5
3,497,917	-				+1.2
3,497,924	-				+0.4
3,498,002	+				+1.7
3,498,022	+		CCNA_03319	0.11	+0.1
3,498,065	-		CCNA_03319	0.17	-0.7
3,498,082	-		CCNA_03319	0.19	+0.9
3,498,092	+		CCNA_03319	0.20	+1.3
3,498,102	+		CCNA_03319	0.21	-1.2
3,498,107	+		CCNA_03319	0.22	-0.0
3,498,133	-		CCNA_03319	0.25	+1.2
3,498,140	-		CCNA_03319	0.26	+1.7
3,498,155	-		CCNA_03319	0.28	+1.9
3,498,162	+		CCNA_03319	0.29	+1.4
3,498,214	-		CCNA_03319	0.35	+0.3
3,498,220	+		CCNA_03319	0.36	+1.0
3,498,228	-		CCNA_03319	0.37	+1.5
3,498,264	-		CCNA_03319	0.41	+0.7
3,498,269	-		CCNA_03319	0.42	+0.8
3,498,285	+		CCNA_03319	0.44	+1.8
3,498,293	-		CCNA_03319	0.45	+3.0
3,498,301	-		CCNA_03319	0.46	+0.6
3,498,330	-		CCNA_03319	0.50	+0.8
3,498,330	-		CCNA_03319	0.50	-0.9
3,498,349	-		CCNA_03319	0.52	+1.6
3,498,387	+		CCNA_03319	0.57	-2.0
3,498,417	-		CCNA_03319	0.61	+1.6
3,498,450	+		CCNA_03319	0.65	-0.0
3,498,455	+		CCNA_03319	0.65	-1.6
3,498,455	+		CCNA_03319	0.65	+0.4
3,498,463	-		CCNA_03319	0.66	+1.7
3,498,463	-		CCNA_03319	0.66	+0.3
3,498,489	+		CCNA_03319	0.70	+0.4
3,498,496	+		CCNA_03319	0.70	-1.7
3,498,546	+		CCNA_03319	0.77	+0.1
3,498,556	+		CCNA_03319	0.78	-0.3
3,498,561	+		CCNA_03319	0.79	-0.9
3,498,561	+		CCNA_03319	0.79	-0.9
3,498,569	-		CCNA_03319	0.80	+0.0
3,498,631	-		CCNA_03319	0.87	+0.8
3,498,641	-		CCNA_03319	0.89	+0.9
3,498,690	-				+1.2
3,498,695	-				+1.3
3,498,768	-				-0.5
3,498,773	+				+1.4
3,498,799	-				+0.5
3,498,837	+				-0.7
3,498,852	+				+1.1
3,498,919	+				+1.3
3,498,927	-				+1.2
3,499,000	-				+1.2
3,499,009	+				+0.2
3,499,010	-				+0.2
3,499,015	+				-1.9
3,499,055	+				+1.4
3,499,060	+				-0.5
3,499,060	+				+0.3
3,499,063	-				-0.6
3,499,063	-				+0.6
3,499,082	+				+0.1
3,499,128	-				-0.6
3,499,128	-				-0.2
3,499,132	+				+0.3
3,499,252	-		CCNA_03320	0.13	+0.5
3,499,288	-		CCNA_03320	0.14	+1.9
3,499,343	+		CCNA_03320	0.15	-1.6
3,499,343	+		CCNA_03320	0.15	+0.4
3,499,388	+		CCNA_03320	0.17	-0.6
3,499,394	+		CCNA_03320	0.17	+0.9
3,499,504	-		CCNA_03320	0.20	+0.6
3,499,533	+		CCNA_03320	0.21	+0.0
3,499,533	+		CCNA_03320	0.21	+1.4
3,499,533	+		CCNA_03320	0.21	+0.0
3,499,533	+		CCNA_03320	0.21	+0.1
3,499,541	-		CCNA_03320	0.22	+1.1
3,499,594	-		CCNA_03320	0.23	+0.4
3,499,594	-		CCNA_03320	0.23	-0.2
3,499,594	-		CCNA_03320	0.23	+0.4
3,499,609	+		CCNA_03320	0.24	-0.1
3,499,659	-		CCNA_03320	0.25	-1.9
3,499,666	+		CCNA_03320	0.25	+0.6
3,499,725	+		CCNA_03320	0.27	+1.1