Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02838

Experiment: PYE pH6 copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE pH6 copy B
2,989,734	-		CCNA_02836	0.38	-0.1
2,989,759	-		CCNA_02836	0.43	-0.3
2,989,782	+		CCNA_02836	0.48	+0.7
2,989,830	-		CCNA_02836	0.59	-0.1
2,989,831	-		CCNA_02836	0.59	+2.3
2,989,831	-		CCNA_02836	0.59	+1.0
2,989,878	-		CCNA_02836	0.69	+1.2
2,989,888	-		CCNA_02836	0.72	+1.2
2,989,930	-		CCNA_02836	0.81	-1.7
2,990,000	-				-1.1
2,990,035	-				+1.7
2,990,056	-				-0.9
2,990,057	+				-2.9
2,990,154	+		CCNA_02837	0.22	+1.9
2,990,158	-		CCNA_02837	0.22	-1.2
2,990,161	+		CCNA_02837	0.23	+1.4
2,990,173	+		CCNA_02837	0.25	-1.3
2,990,246	+		CCNA_02837	0.38	+0.3
2,990,251	+		CCNA_02837	0.39	-1.7
2,990,307	+		CCNA_02837	0.49	-1.9
2,990,308	-		CCNA_02837	0.49	+0.5
2,990,407	+		CCNA_02837	0.67	+0.1
2,990,407	+		CCNA_02837	0.67	-1.3
2,990,407	+		CCNA_02837	0.67	-0.3
2,990,407	+				+0.7
2,990,407	+		CCNA_02837	0.67	-2.5
2,990,407	+		CCNA_02837	0.67	+1.7
2,990,415	-		CCNA_02837	0.68	-0.3
2,990,415	-		CCNA_02837	0.68	-1.0
2,990,429	+		CCNA_02837	0.71	-1.1
2,990,452	+		CCNA_02837	0.75	-0.8
2,990,470	-		CCNA_02837	0.78	-0.6
2,990,476	+		CCNA_02837	0.79	+0.4
2,990,507	+		CCNA_02837	0.84	-0.9
2,990,507	+		CCNA_02837	0.84	-0.9
2,990,515	-		CCNA_02837	0.86	-0.5
2,990,524	-		CCNA_02837	0.88	+0.2
2,990,526	+		CCNA_02837	0.88	+1.7
2,990,566	+				-0.2
2,990,588	+				-2.2
2,990,596	-				+0.6
2,990,617	-				+0.3
2,990,645	+				-0.2
2,990,645	+				-2.9
2,990,645	+				+1.4
2,990,651	+				-0.0
2,990,653	-				+0.6
2,990,653	-				-1.7
2,990,653	-				+0.5
2,990,693	+		CCNA_02838	0.18	+1.4
2,990,752	+		CCNA_02838	0.33	-0.0
2,990,760	-		CCNA_02838	0.35	+0.1
2,990,760	-		CCNA_02838	0.35	-2.9
2,990,762	+		CCNA_02838	0.35	+0.6
2,990,770	-		CCNA_02838	0.37	+1.0
2,990,783	+		CCNA_02838	0.41	-0.7
2,990,801	+		CCNA_02838	0.45	-0.7
2,990,801	+		CCNA_02838	0.45	-3.0
2,990,809	-		CCNA_02838	0.47	-0.3
2,990,838	-		CCNA_02838	0.54	-0.3
2,990,921	+		CCNA_02838	0.75	+1.3
2,990,921	+		CCNA_02838	0.75	-0.7
2,990,921	+		CCNA_02838	0.75	-0.3
2,990,921	+		CCNA_02838	0.75	-0.8
2,990,925	+		CCNA_02838	0.76	+0.5
2,990,931	+		CCNA_02838	0.77	-0.7
2,990,931	+		CCNA_02838	0.77	-1.1
2,990,931	+		CCNA_02838	0.77	-0.7
2,990,931	+		CCNA_02838	0.77	-0.5
2,990,931	+		CCNA_02838	0.77	-1.5
2,990,931	+		CCNA_02838	0.77	-2.3
2,990,931	+		CCNA_02838	0.77	-0.6
2,990,931	+		CCNA_02838	0.77	-1.7
2,990,931	+		CCNA_02838	0.77	-0.5
2,990,931	+		CCNA_02838	0.77	-0.2
2,990,937	+		CCNA_02838	0.79	-0.7
2,990,939	-		CCNA_02838	0.79	+1.7
2,990,939	-		CCNA_02838	0.79	-1.9
2,990,939	-		CCNA_02838	0.79	-1.7
2,990,939	-		CCNA_02838	0.79	-0.7
2,990,939	-		CCNA_02838	0.79	-1.5
2,990,939	-		CCNA_02838	0.79	-0.9
2,990,939	-		CCNA_02838	0.79	+0.2
2,990,939	-		CCNA_02838	0.79	-2.3
2,990,939	-		CCNA_02838	0.79	-0.0
2,990,939	-		CCNA_02838	0.79	-1.5
2,990,939	-		CCNA_02838	0.79	-0.5
2,990,964	+		CCNA_02838	0.86	-2.0
2,990,965	+		CCNA_02838	0.86	+0.7
2,990,965	+		CCNA_02838	0.86	-1.1
2,990,973	-		CCNA_02838	0.88	-0.3
2,990,983	+				-1.0
2,990,991	+				+0.7
2,991,011	+				-0.9
2,991,019	-				+1.7
2,991,019	-				+0.1
2,991,032	-				+0.5
2,991,036	+				-1.7
2,991,053	-				+0.2
2,991,058	-				+1.2
2,991,131	+				-0.0
2,991,139	-				+0.3
2,991,174	+				+1.1
2,991,188	-				-0.7
2,991,215	+				-1.1
2,991,223	-				+0.1
2,991,237	+				-0.8
2,991,237	+				-0.6
2,991,245	-				-1.1
2,991,245	-				+0.2
2,991,245	-				+0.1
2,991,275	+				-0.6
2,991,275	+				-1.5
2,991,275	+				-0.7
2,991,283	-				+0.4
2,991,283	-				-0.0
2,991,283	-				+1.4
2,991,283	-				-0.3
2,991,283	-				+0.3
2,991,285	+				-0.9
2,991,305	-				+1.1
2,991,305	-				+1.2
2,991,339	+				-1.5
2,991,347	-				+1.0
2,991,355	+				-2.3
2,991,377	-				-1.9
2,991,459	+				-0.3
2,991,467	-				-0.7
2,991,467	-				-1.0
2,991,467	-				-1.1
2,991,467	-				+0.7
2,991,467	-				-0.5
2,991,472	+				+0.2
2,991,510	-				-0.2
2,991,548	-				+0.7
2,991,675	-				+1.7
2,991,678	+		CCNA_02839	0.13	-1.7
2,991,743	-		CCNA_02839	0.15	-1.0
2,991,788	-		CCNA_02839	0.17	-0.3
2,991,794	-		CCNA_02839	0.17	-0.3
2,991,820	-		CCNA_02839	0.18	+0.7
2,991,841	-		CCNA_02839	0.19	+0.3
2,991,967	-		CCNA_02839	0.23	-0.8
2,992,000	+		CCNA_02839	0.24	-1.7