Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4743 and Ac3H11_4744 are separated by 6 nucleotides Ac3H11_4744 and Ac3H11_4745 are separated by 4 nucleotides Ac3H11_4745 and Ac3H11_4746 overlap by 26 nucleotides Ac3H11_4746 and Ac3H11_4747 overlap by 6 nucleotides
Ac3H11_4743 - Outer membrane stress sensor protease DegS, at 47,263 to 48,423
_4743
Ac3H11_4744 - hypothetical protein, at 48,430 to 48,552
_4744
Ac3H11_4745 - FIG137478: Hypothetical protein YbgI, at 48,557 to 49,324
_4745
Ac3H11_4746 - hypothetical protein, at 49,299 to 49,454
_4746
Ac3H11_4747 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 49,449 to 50,477
_4747
Position (kb)
49
50 Strain fitness (log2 ratio)
-2
-1
0
1 at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.848 kb on + strand, within Ac3H11_4745 at 49.112 kb on + strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.343 kb on + strand, within Ac3H11_4746 at 49.343 kb on + strand, within Ac3H11_4746 at 49.344 kb on - strand, within Ac3H11_4746 at 49.344 kb on - strand, within Ac3H11_4746 at 49.361 kb on + strand, within Ac3H11_4746 at 49.362 kb on - strand, within Ac3H11_4746
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 48,438 - -0.1 48,438 - +0.0 48,438 - -0.1 48,438 - -0.7 48,438 - +0.5 48,438 - -2.1 48,438 - +0.2 48,438 - -1.1 48,848 + Ac3H11_4745 0.38 -0.4 49,112 + Ac3H11_4745 0.72 +1.2 49,113 - Ac3H11_4745 0.72 +0.8 49,113 - Ac3H11_4745 0.72 +0.9 49,113 - Ac3H11_4745 0.72 +1.1 49,343 + Ac3H11_4746 0.28 -0.0 49,343 + Ac3H11_4746 0.28 -0.0 49,344 - Ac3H11_4746 0.29 -0.1 49,344 - Ac3H11_4746 0.29 -0.4 49,361 + Ac3H11_4746 0.40 +0.5 49,362 - Ac3H11_4746 0.40 -0.3
Or see this region's nucleotide sequence