Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31250 and AZOBR_RS31255 are separated by 8 nucleotides AZOBR_RS31255 and AZOBR_RS31260 are separated by 111 nucleotides
AZOBR_RS31250: AZOBR_RS31250 - ABC transporter permease, at 375,941 to 377,152
_RS31250
AZOBR_RS31255: AZOBR_RS31255 - galactose 1-dehydrogenase, at 377,161 to 378,138
_RS31255
AZOBR_RS31260: AZOBR_RS31260 - dihydroxy-acid dehydratase, at 378,250 to 380,076
_RS31260
Position (kb) 377
378
379 Strain fitness (log2 ratio) -1
0
1
2 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.658 kb on + strand, within AZOBR_RS31250 at 376.659 kb on - strand at 376.659 kb on - strand, within AZOBR_RS31250 at 376.659 kb on - strand, within AZOBR_RS31250 at 376.733 kb on + strand, within AZOBR_RS31250 at 376.734 kb on - strand, within AZOBR_RS31250 at 376.734 kb on - strand, within AZOBR_RS31250 at 376.841 kb on + strand, within AZOBR_RS31250 at 377.132 kb on + strand at 377.132 kb on + strand at 377.133 kb on - strand at 377.133 kb on - strand at 377.923 kb on - strand, within AZOBR_RS31255 at 378.004 kb on + strand, within AZOBR_RS31255 at 378.004 kb on + strand, within AZOBR_RS31255 at 378.016 kb on + strand, within AZOBR_RS31255 at 378.017 kb on - strand, within AZOBR_RS31255 at 378.136 kb on + strand at 378.136 kb on + strand at 378.359 kb on - strand at 378.359 kb on - strand at 378.359 kb on - strand at 378.371 kb on - strand at 378.994 kb on + strand, within AZOBR_RS31260 at 378.995 kb on - strand, within AZOBR_RS31260 at 378.995 kb on - strand, within AZOBR_RS31260
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 376,658 + AZOBR_RS31250 0.59 -0.2 376,658 + AZOBR_RS31250 0.59 +1.1 376,658 + AZOBR_RS31250 0.59 -0.0 376,658 + AZOBR_RS31250 0.59 +2.0 376,658 + AZOBR_RS31250 0.59 -0.1 376,659 - +1.8 376,659 - AZOBR_RS31250 0.59 +0.7 376,659 - AZOBR_RS31250 0.59 -0.8 376,733 + AZOBR_RS31250 0.65 -0.6 376,734 - AZOBR_RS31250 0.65 +1.1 376,734 - AZOBR_RS31250 0.65 -0.8 376,841 + AZOBR_RS31250 0.74 -0.6 377,132 + -0.6 377,132 + +0.3 377,133 - -0.1 377,133 - -1.2 377,923 - AZOBR_RS31255 0.78 +1.6 378,004 + AZOBR_RS31255 0.86 -0.8 378,004 + AZOBR_RS31255 0.86 +0.8 378,016 + AZOBR_RS31255 0.87 -0.3 378,017 - AZOBR_RS31255 0.88 -0.2 378,136 + -1.2 378,136 + +0.6 378,359 - +0.2 378,359 - -1.4 378,359 - -0.1 378,371 - -0.1 378,994 + AZOBR_RS31260 0.41 +0.2 378,995 - AZOBR_RS31260 0.41 -1.2 378,995 - AZOBR_RS31260 0.41 +0.8
Or see this region's nucleotide sequence