Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15565 and AZOBR_RS15570 overlap by 4 nucleotides AZOBR_RS15570 and AZOBR_RS15575 overlap by 4 nucleotides AZOBR_RS15575 and AZOBR_RS15580 overlap by 4 nucleotides
AZOBR_RS15565: AZOBR_RS15565 - isopropylmalate isomerase, at 246,309 to 247,715
_RS15565
AZOBR_RS15570: AZOBR_RS15570 - 3-ketosteroid dehydrogenase, at 247,712 to 249,133
_RS15570
AZOBR_RS15575: AZOBR_RS15575 - cysteine hydrolase, at 249,130 to 249,744
_RS15575
AZOBR_RS15580: AZOBR_RS15580 - hydantoin utilization protein A, at 249,741 to 251,813
_RS15580
Position (kb) 247
248
249
250 Strain fitness (log2 ratio) -2
-1
0
1 at 246.736 kb on + strand, within AZOBR_RS15565 at 246.736 kb on + strand, within AZOBR_RS15565 at 246.737 kb on - strand, within AZOBR_RS15565 at 246.737 kb on - strand, within AZOBR_RS15565 at 246.737 kb on - strand, within AZOBR_RS15565 at 246.960 kb on - strand, within AZOBR_RS15565 at 246.968 kb on - strand, within AZOBR_RS15565 at 246.968 kb on - strand, within AZOBR_RS15565 at 246.968 kb on - strand, within AZOBR_RS15565 at 247.519 kb on + strand, within AZOBR_RS15565 at 247.520 kb on - strand, within AZOBR_RS15565 at 247.520 kb on - strand, within AZOBR_RS15565 at 247.806 kb on + strand at 247.858 kb on - strand, within AZOBR_RS15570 at 247.977 kb on + strand, within AZOBR_RS15570 at 247.978 kb on - strand, within AZOBR_RS15570 at 248.262 kb on + strand, within AZOBR_RS15570 at 248.463 kb on + strand, within AZOBR_RS15570 at 248.521 kb on - strand, within AZOBR_RS15570 at 248.619 kb on + strand, within AZOBR_RS15570 at 248.620 kb on - strand, within AZOBR_RS15570 at 248.752 kb on - strand, within AZOBR_RS15570 at 249.380 kb on + strand, within AZOBR_RS15575 at 249.380 kb on + strand, within AZOBR_RS15575 at 249.381 kb on - strand, within AZOBR_RS15575 at 249.381 kb on - strand, within AZOBR_RS15575 at 249.381 kb on - strand, within AZOBR_RS15575 at 249.381 kb on - strand, within AZOBR_RS15575 at 249.381 kb on - strand, within AZOBR_RS15575 at 249.660 kb on - strand, within AZOBR_RS15575 at 250.078 kb on + strand, within AZOBR_RS15580 at 250.078 kb on + strand, within AZOBR_RS15580 at 250.079 kb on - strand at 250.079 kb on - strand, within AZOBR_RS15580 at 250.079 kb on - strand, within AZOBR_RS15580
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 246,736 + AZOBR_RS15565 0.30 -0.2 246,736 + AZOBR_RS15565 0.30 +0.4 246,737 - AZOBR_RS15565 0.30 +0.1 246,737 - AZOBR_RS15565 0.30 -0.1 246,737 - AZOBR_RS15565 0.30 +1.1 246,960 - AZOBR_RS15565 0.46 +0.2 246,968 - AZOBR_RS15565 0.47 -0.2 246,968 - AZOBR_RS15565 0.47 +0.3 246,968 - AZOBR_RS15565 0.47 -0.2 247,519 + AZOBR_RS15565 0.86 -0.2 247,520 - AZOBR_RS15565 0.86 +0.1 247,520 - AZOBR_RS15565 0.86 -1.8 247,806 + +0.2 247,858 - AZOBR_RS15570 0.10 +0.6 247,977 + AZOBR_RS15570 0.19 -0.3 247,978 - AZOBR_RS15570 0.19 +0.7 248,262 + AZOBR_RS15570 0.39 +1.4 248,463 + AZOBR_RS15570 0.53 +0.4 248,521 - AZOBR_RS15570 0.57 +0.4 248,619 + AZOBR_RS15570 0.64 +0.0 248,620 - AZOBR_RS15570 0.64 +0.5 248,752 - AZOBR_RS15570 0.73 +0.6 249,380 + AZOBR_RS15575 0.41 +0.7 249,380 + AZOBR_RS15575 0.41 -0.1 249,381 - AZOBR_RS15575 0.41 +0.3 249,381 - AZOBR_RS15575 0.41 -0.1 249,381 - AZOBR_RS15575 0.41 -0.5 249,381 - AZOBR_RS15575 0.41 +0.1 249,381 - AZOBR_RS15575 0.41 +0.8 249,660 - AZOBR_RS15575 0.86 +0.5 250,078 + AZOBR_RS15580 0.16 -0.2 250,078 + AZOBR_RS15580 0.16 +0.8 250,079 - -0.4 250,079 - AZOBR_RS15580 0.16 -1.1 250,079 - AZOBR_RS15580 0.16 +0.4
Or see this region's nucleotide sequence