Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03120 and AZOBR_RS03125 are separated by 14 nucleotides AZOBR_RS03125 and AZOBR_RS03130 are separated by 286 nucleotides
AZOBR_RS03120: AZOBR_RS03120 - ornithine cyclodeaminase, at 665,334 to 666,290
_RS03120
AZOBR_RS03125: AZOBR_RS03125 - FAD dependent oxidoreductase, at 666,305 to 667,417
_RS03125
AZOBR_RS03130: AZOBR_RS03130 - hypothetical protein, at 667,704 to 668,327
_RS03130
Position (kb) 666
667
668 Strain fitness (log2 ratio) -1
0
1 at 665.587 kb on - strand, within AZOBR_RS03120 at 665.688 kb on + strand, within AZOBR_RS03120 at 665.689 kb on - strand, within AZOBR_RS03120 at 666.148 kb on - strand, within AZOBR_RS03120 at 666.186 kb on + strand, within AZOBR_RS03120 at 666.464 kb on + strand, within AZOBR_RS03125 at 666.465 kb on - strand, within AZOBR_RS03125 at 666.974 kb on + strand, within AZOBR_RS03125 at 666.975 kb on - strand, within AZOBR_RS03125 at 667.055 kb on + strand, within AZOBR_RS03125 at 667.238 kb on + strand, within AZOBR_RS03125 at 667.238 kb on + strand, within AZOBR_RS03125 at 667.238 kb on + strand, within AZOBR_RS03125 at 667.239 kb on - strand, within AZOBR_RS03125 at 667.239 kb on - strand, within AZOBR_RS03125 at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.548 kb on + strand at 667.731 kb on + strand at 667.731 kb on + strand at 667.732 kb on - strand at 668.128 kb on - strand, within AZOBR_RS03130 at 668.214 kb on - strand, within AZOBR_RS03130
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 665,587 - AZOBR_RS03120 0.26 +0.2 665,688 + AZOBR_RS03120 0.37 +0.7 665,689 - AZOBR_RS03120 0.37 -0.4 666,148 - AZOBR_RS03120 0.85 +0.2 666,186 + AZOBR_RS03120 0.89 +0.7 666,464 + AZOBR_RS03125 0.14 +0.0 666,465 - AZOBR_RS03125 0.14 -0.3 666,974 + AZOBR_RS03125 0.60 -0.5 666,975 - AZOBR_RS03125 0.60 -0.1 667,055 + AZOBR_RS03125 0.67 +0.1 667,238 + AZOBR_RS03125 0.84 -0.1 667,238 + AZOBR_RS03125 0.84 +0.1 667,238 + AZOBR_RS03125 0.84 +0.5 667,239 - AZOBR_RS03125 0.84 -0.2 667,239 - AZOBR_RS03125 0.84 -1.2 667,548 + -0.3 667,548 + +0.7 667,548 + -0.2 667,548 + -0.4 667,548 + +0.7 667,548 + +0.3 667,731 + +0.2 667,731 + -0.4 667,732 - -0.2 668,128 - AZOBR_RS03130 0.68 +0.6 668,214 - AZOBR_RS03130 0.82 +0.3
Or see this region's nucleotide sequence