Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18880 and ABZR86_RS18885 are separated by 527 nucleotides ABZR86_RS18885 and ABZR86_RS18890 are separated by 311 nucleotides
ABZR86_RS18880: ABZR86_RS18880 - glycine cleavage system protein GcvH, at 206,863 to 207,258
_RS18880
ABZR86_RS18885: ABZR86_RS18885 - met regulon transcriptional regulator MetJ, at 207,786 to 208,340
_RS18885
ABZR86_RS18890: ABZR86_RS18890 - energy transducer TonB, at 208,652 to 209,683
_RS18890
Position (kb) 207
208
209 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 206.806 kb on + strand at 206.806 kb on + strand at 206.806 kb on + strand at 206.807 kb on - strand at 206.807 kb on - strand at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.987 kb on - strand, within ABZR86_RS18880 at 207.073 kb on + strand, within ABZR86_RS18880 at 207.073 kb on + strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.559 kb on - strand at 207.613 kb on - strand at 207.752 kb on + strand at 207.768 kb on + strand at 207.813 kb on + strand at 207.813 kb on + strand at 207.814 kb on - strand at 207.863 kb on + strand, within ABZR86_RS18885 at 207.864 kb on - strand, within ABZR86_RS18885 at 207.864 kb on - strand, within ABZR86_RS18885 at 207.880 kb on + strand, within ABZR86_RS18885 at 207.903 kb on - strand, within ABZR86_RS18885 at 207.978 kb on - strand, within ABZR86_RS18885 at 208.019 kb on + strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.338 kb on + strand at 208.338 kb on + strand at 208.338 kb on + strand at 208.339 kb on - strand at 208.339 kb on - strand at 208.551 kb on + strand at 208.552 kb on - strand at 208.603 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.668 kb on + strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.669 kb on - strand at 208.700 kb on - strand at 208.716 kb on + strand at 208.716 kb on + strand at 208.717 kb on - strand at 208.964 kb on + strand, within ABZR86_RS18890 at 208.964 kb on + strand, within ABZR86_RS18890 at 208.964 kb on + strand, within ABZR86_RS18890 at 208.965 kb on - strand, within ABZR86_RS18890 at 209.045 kb on - strand, within ABZR86_RS18890 at 209.129 kb on + strand, within ABZR86_RS18890 at 209.130 kb on - strand, within ABZR86_RS18890 at 209.130 kb on - strand, within ABZR86_RS18890 at 209.140 kb on + strand, within ABZR86_RS18890
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 206,806 + -1.4 206,806 + -1.1 206,806 + -0.2 206,807 - +0.1 206,807 - +0.1 206,986 + ABZR86_RS18880 0.31 -1.9 206,986 + ABZR86_RS18880 0.31 -1.3 206,986 + ABZR86_RS18880 0.31 -2.4 206,986 + ABZR86_RS18880 0.31 -2.4 206,986 + ABZR86_RS18880 0.31 -3.2 206,986 + ABZR86_RS18880 0.31 -2.3 206,986 + ABZR86_RS18880 0.31 -0.9 206,986 + ABZR86_RS18880 0.31 -2.2 206,986 + ABZR86_RS18880 0.31 -2.4 206,986 + ABZR86_RS18880 0.31 +0.8 206,986 + ABZR86_RS18880 0.31 -2.7 206,986 + ABZR86_RS18880 0.31 -1.4 206,986 + ABZR86_RS18880 0.31 -2.6 206,986 + ABZR86_RS18880 0.31 -2.7 206,987 - ABZR86_RS18880 0.31 -1.4 207,073 + ABZR86_RS18880 0.53 -2.2 207,073 + ABZR86_RS18880 0.53 -0.9 207,074 - ABZR86_RS18880 0.53 -2.2 207,074 - ABZR86_RS18880 0.53 -0.6 207,074 - ABZR86_RS18880 0.53 -1.3 207,074 - ABZR86_RS18880 0.53 -1.9 207,074 - ABZR86_RS18880 0.53 -1.5 207,559 - +1.2 207,613 - +1.1 207,752 + -2.1 207,768 + -0.5 207,813 + +0.8 207,813 + -0.3 207,814 - +1.5 207,863 + ABZR86_RS18885 0.14 -0.5 207,864 - ABZR86_RS18885 0.14 +1.6 207,864 - ABZR86_RS18885 0.14 -0.5 207,880 + ABZR86_RS18885 0.17 -0.4 207,903 - ABZR86_RS18885 0.21 +1.1 207,978 - ABZR86_RS18885 0.35 +0.9 208,019 + ABZR86_RS18885 0.42 +1.3 208,020 - ABZR86_RS18885 0.42 +1.0 208,020 - ABZR86_RS18885 0.42 +2.4 208,020 - ABZR86_RS18885 0.42 +1.4 208,020 - ABZR86_RS18885 0.42 +1.7 208,338 + +0.2 208,338 + -0.9 208,338 + -0.4 208,339 - -1.0 208,339 - -1.1 208,551 + +0.2 208,552 - +0.8 208,603 + -0.4 208,668 + +0.2 208,668 + +0.8 208,668 + +0.9 208,668 + +0.9 208,668 + +0.2 208,668 + +0.3 208,668 + +1.3 208,668 + +0.4 208,668 + +2.0 208,668 + -1.0 208,668 + -1.0 208,668 + +0.5 208,669 - +0.7 208,669 - +0.8 208,669 - +1.0 208,669 - +1.2 208,669 - +0.4 208,669 - +0.2 208,669 - +0.9 208,669 - +0.9 208,669 - +1.0 208,669 - +1.6 208,669 - +0.4 208,669 - +1.5 208,700 - +0.2 208,716 + +0.5 208,716 + +1.3 208,717 - +1.2 208,964 + ABZR86_RS18890 0.30 +0.3 208,964 + ABZR86_RS18890 0.30 +0.3 208,964 + ABZR86_RS18890 0.30 +0.3 208,965 - ABZR86_RS18890 0.30 +0.7 209,045 - ABZR86_RS18890 0.38 +0.7 209,129 + ABZR86_RS18890 0.46 +0.2 209,130 - ABZR86_RS18890 0.46 +0.0 209,130 - ABZR86_RS18890 0.46 -0.1 209,140 + ABZR86_RS18890 0.47 +0.6
Or see this region's nucleotide sequence