Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16590 and ABZR86_RS16595 are separated by 4 nucleotides ABZR86_RS16595 and ABZR86_RS16600 are separated by 296 nucleotides
ABZR86_RS16590: ABZR86_RS16590 - RHS repeat-associated core domain-containing protein, at 3,744,403 to 3,745,272
_RS16590
ABZR86_RS16595: ABZR86_RS16595 - tetratricopeptide repeat protein, at 3,745,277 to 3,745,705
_RS16595
ABZR86_RS16600: ABZR86_RS16600 - hypothetical protein, at 3,746,002 to 3,751,902
_RS16600
Position (kb)
3745
3746 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3744.345 kb on + strand at 3744.466 kb on + strand at 3744.466 kb on + strand at 3744.466 kb on + strand at 3744.466 kb on + strand at 3744.466 kb on + strand at 3744.467 kb on - strand at 3744.467 kb on - strand at 3744.467 kb on - strand at 3744.467 kb on - strand at 3744.470 kb on + strand at 3744.470 kb on + strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.471 kb on - strand at 3744.472 kb on + strand at 3744.472 kb on + strand at 3744.472 kb on + strand at 3744.473 kb on - strand at 3744.473 kb on - strand at 3744.473 kb on - strand at 3744.510 kb on + strand, within ABZR86_RS16590 at 3744.536 kb on - strand, within ABZR86_RS16590 at 3744.536 kb on - strand, within ABZR86_RS16590 at 3744.536 kb on - strand, within ABZR86_RS16590 at 3744.541 kb on + strand, within ABZR86_RS16590 at 3744.550 kb on + strand, within ABZR86_RS16590 at 3744.551 kb on - strand, within ABZR86_RS16590 at 3744.563 kb on + strand, within ABZR86_RS16590 at 3744.566 kb on + strand, within ABZR86_RS16590 at 3744.566 kb on + strand, within ABZR86_RS16590 at 3744.593 kb on - strand, within ABZR86_RS16590 at 3744.593 kb on - strand, within ABZR86_RS16590 at 3744.595 kb on - strand, within ABZR86_RS16590 at 3744.595 kb on - strand, within ABZR86_RS16590 at 3744.595 kb on - strand, within ABZR86_RS16590 at 3744.631 kb on + strand, within ABZR86_RS16590 at 3744.631 kb on + strand, within ABZR86_RS16590 at 3744.631 kb on + strand, within ABZR86_RS16590 at 3744.631 kb on + strand, within ABZR86_RS16590 at 3744.632 kb on - strand, within ABZR86_RS16590 at 3744.632 kb on - strand, within ABZR86_RS16590 at 3744.632 kb on - strand, within ABZR86_RS16590 at 3744.632 kb on - strand, within ABZR86_RS16590 at 3744.632 kb on - strand, within ABZR86_RS16590 at 3744.634 kb on - strand, within ABZR86_RS16590 at 3744.680 kb on + strand, within ABZR86_RS16590 at 3744.680 kb on + strand, within ABZR86_RS16590 at 3744.680 kb on + strand, within ABZR86_RS16590 at 3744.681 kb on - strand, within ABZR86_RS16590 at 3744.681 kb on - strand, within ABZR86_RS16590 at 3744.710 kb on + strand, within ABZR86_RS16590 at 3744.711 kb on - strand, within ABZR86_RS16590 at 3744.711 kb on - strand, within ABZR86_RS16590 at 3744.727 kb on + strand, within ABZR86_RS16590 at 3744.728 kb on - strand, within ABZR86_RS16590 at 3744.728 kb on - strand, within ABZR86_RS16590 at 3744.733 kb on + strand, within ABZR86_RS16590 at 3744.733 kb on + strand, within ABZR86_RS16590 at 3744.734 kb on - strand, within ABZR86_RS16590 at 3744.832 kb on + strand, within ABZR86_RS16590 at 3744.833 kb on - strand, within ABZR86_RS16590 at 3744.833 kb on - strand, within ABZR86_RS16590 at 3744.833 kb on - strand, within ABZR86_RS16590 at 3744.847 kb on - strand, within ABZR86_RS16590 at 3744.955 kb on - strand, within ABZR86_RS16590 at 3745.047 kb on - strand, within ABZR86_RS16590 at 3745.107 kb on + strand, within ABZR86_RS16590 at 3745.107 kb on + strand, within ABZR86_RS16590 at 3745.233 kb on + strand at 3745.233 kb on + strand at 3745.234 kb on - strand at 3745.266 kb on + strand at 3745.267 kb on - strand at 3745.267 kb on - strand at 3745.301 kb on - strand at 3745.301 kb on - strand at 3745.338 kb on + strand, within ABZR86_RS16595 at 3745.339 kb on - strand, within ABZR86_RS16595 at 3745.339 kb on - strand, within ABZR86_RS16595 at 3745.398 kb on - strand, within ABZR86_RS16595 at 3745.419 kb on + strand, within ABZR86_RS16595 at 3745.420 kb on - strand, within ABZR86_RS16595 at 3745.523 kb on + strand, within ABZR86_RS16595 at 3745.752 kb on - strand at 3745.755 kb on + strand at 3745.756 kb on - strand at 3745.795 kb on + strand at 3745.837 kb on + strand at 3745.837 kb on + strand at 3746.113 kb on + strand at 3746.114 kb on - strand at 3746.189 kb on - strand at 3746.189 kb on - strand at 3746.308 kb on + strand at 3746.404 kb on + strand at 3746.405 kb on - strand at 3746.405 kb on - strand at 3746.476 kb on + strand at 3746.476 kb on + strand at 3746.477 kb on - strand at 3746.477 kb on - strand at 3746.506 kb on + strand at 3746.506 kb on + strand at 3746.506 kb on + strand at 3746.506 kb on + strand at 3746.507 kb on - strand at 3746.507 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 3,744,345 + -0.7 3,744,466 + +0.4 3,744,466 + +0.3 3,744,466 + -0.3 3,744,466 + +0.3 3,744,466 + +0.6 3,744,467 - +0.3 3,744,467 - +0.2 3,744,467 - +0.3 3,744,467 - +0.3 3,744,470 + -0.2 3,744,470 + -0.1 3,744,471 - -1.2 3,744,471 - -1.1 3,744,471 - +0.7 3,744,471 - -0.0 3,744,471 - +0.7 3,744,471 - +0.1 3,744,471 - +1.0 3,744,471 - -0.1 3,744,472 + +0.1 3,744,472 + +0.1 3,744,472 + +0.3 3,744,473 - -0.3 3,744,473 - +0.6 3,744,473 - +0.7 3,744,510 + ABZR86_RS16590 0.12 -0.6 3,744,536 - ABZR86_RS16590 0.15 +0.8 3,744,536 - ABZR86_RS16590 0.15 -0.5 3,744,536 - ABZR86_RS16590 0.15 +1.2 3,744,541 + ABZR86_RS16590 0.16 +0.4 3,744,550 + ABZR86_RS16590 0.17 +2.8 3,744,551 - ABZR86_RS16590 0.17 -0.2 3,744,563 + ABZR86_RS16590 0.18 -0.8 3,744,566 + ABZR86_RS16590 0.19 +0.8 3,744,566 + ABZR86_RS16590 0.19 +0.4 3,744,593 - ABZR86_RS16590 0.22 -1.4 3,744,593 - ABZR86_RS16590 0.22 -0.9 3,744,595 - ABZR86_RS16590 0.22 +0.1 3,744,595 - ABZR86_RS16590 0.22 +0.1 3,744,595 - ABZR86_RS16590 0.22 +0.3 3,744,631 + ABZR86_RS16590 0.26 +0.2 3,744,631 + ABZR86_RS16590 0.26 +0.2 3,744,631 + ABZR86_RS16590 0.26 +0.7 3,744,631 + ABZR86_RS16590 0.26 -1.0 3,744,632 - ABZR86_RS16590 0.26 +0.0 3,744,632 - ABZR86_RS16590 0.26 -1.5 3,744,632 - ABZR86_RS16590 0.26 -0.2 3,744,632 - ABZR86_RS16590 0.26 -1.2 3,744,632 - ABZR86_RS16590 0.26 +1.0 3,744,634 - ABZR86_RS16590 0.27 +0.1 3,744,680 + ABZR86_RS16590 0.32 +0.3 3,744,680 + ABZR86_RS16590 0.32 +0.1 3,744,680 + ABZR86_RS16590 0.32 +0.8 3,744,681 - ABZR86_RS16590 0.32 -0.6 3,744,681 - ABZR86_RS16590 0.32 -2.0 3,744,710 + ABZR86_RS16590 0.35 +0.4 3,744,711 - ABZR86_RS16590 0.35 +0.2 3,744,711 - ABZR86_RS16590 0.35 -0.9 3,744,727 + ABZR86_RS16590 0.37 +0.6 3,744,728 - ABZR86_RS16590 0.37 +1.9 3,744,728 - ABZR86_RS16590 0.37 -0.0 3,744,733 + ABZR86_RS16590 0.38 +0.4 3,744,733 + ABZR86_RS16590 0.38 -0.1 3,744,734 - ABZR86_RS16590 0.38 +0.3 3,744,832 + ABZR86_RS16590 0.49 +0.3 3,744,833 - ABZR86_RS16590 0.49 -0.4 3,744,833 - ABZR86_RS16590 0.49 -0.6 3,744,833 - ABZR86_RS16590 0.49 -0.1 3,744,847 - ABZR86_RS16590 0.51 +0.3 3,744,955 - ABZR86_RS16590 0.63 -0.0 3,745,047 - ABZR86_RS16590 0.74 +0.3 3,745,107 + ABZR86_RS16590 0.81 -0.1 3,745,107 + ABZR86_RS16590 0.81 -0.7 3,745,233 + -2.5 3,745,233 + -1.1 3,745,234 - +0.8 3,745,266 + -0.4 3,745,267 - -0.1 3,745,267 - +0.2 3,745,301 - +0.6 3,745,301 - -0.2 3,745,338 + ABZR86_RS16595 0.14 +0.1 3,745,339 - ABZR86_RS16595 0.14 -0.4 3,745,339 - ABZR86_RS16595 0.14 -1.0 3,745,398 - ABZR86_RS16595 0.28 -0.7 3,745,419 + ABZR86_RS16595 0.33 -0.1 3,745,420 - ABZR86_RS16595 0.33 -0.3 3,745,523 + ABZR86_RS16595 0.57 -0.2 3,745,752 - -1.8 3,745,755 + +0.5 3,745,756 - +0.1 3,745,795 + +0.8 3,745,837 + +0.2 3,745,837 + +1.1 3,746,113 + -0.2 3,746,114 - -1.2 3,746,189 - +0.1 3,746,189 - +0.9 3,746,308 + -0.0 3,746,404 + +0.0 3,746,405 - -1.3 3,746,405 - +0.1 3,746,476 + -0.9 3,746,476 + +0.2 3,746,477 - +0.8 3,746,477 - +0.1 3,746,506 + +0.1 3,746,506 + +0.3 3,746,506 + -0.2 3,746,506 + -0.6 3,746,507 - -0.7 3,746,507 - +0.4
Or see this region's nucleotide sequence