Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16205 and ABZR86_RS16210 are separated by 99 nucleotides ABZR86_RS16210 and ABZR86_RS16215 are separated by 209 nucleotides
ABZR86_RS16205: ABZR86_RS16205 - LysR family transcriptional regulator, at 3,659,770 to 3,660,669
_RS16205
ABZR86_RS16210: ABZR86_RS16210 - acyl-CoA thioesterase, at 3,660,769 to 3,661,155
_RS16210
ABZR86_RS16215: ABZR86_RS16215 - S9 family peptidase, at 3,661,365 to 3,663,689
_RS16215
Position (kb)
3660
3661
3662 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3659.962 kb on + strand, within ABZR86_RS16205 at 3659.962 kb on + strand, within ABZR86_RS16205 at 3659.962 kb on + strand, within ABZR86_RS16205 at 3659.962 kb on + strand, within ABZR86_RS16205 at 3659.962 kb on + strand, within ABZR86_RS16205 at 3659.963 kb on - strand, within ABZR86_RS16205 at 3659.963 kb on - strand, within ABZR86_RS16205 at 3659.963 kb on - strand, within ABZR86_RS16205 at 3659.963 kb on - strand, within ABZR86_RS16205 at 3659.965 kb on + strand, within ABZR86_RS16205 at 3659.966 kb on - strand, within ABZR86_RS16205 at 3660.121 kb on + strand, within ABZR86_RS16205 at 3660.160 kb on + strand, within ABZR86_RS16205 at 3660.161 kb on - strand, within ABZR86_RS16205 at 3660.161 kb on - strand, within ABZR86_RS16205 at 3660.280 kb on + strand, within ABZR86_RS16205 at 3660.454 kb on + strand, within ABZR86_RS16205 at 3660.454 kb on + strand, within ABZR86_RS16205 at 3660.455 kb on - strand, within ABZR86_RS16205 at 3660.455 kb on - strand, within ABZR86_RS16205 at 3660.455 kb on - strand, within ABZR86_RS16205 at 3660.589 kb on + strand at 3660.589 kb on + strand at 3660.589 kb on + strand at 3660.590 kb on - strand at 3660.590 kb on - strand at 3660.667 kb on + strand at 3660.668 kb on - strand at 3660.668 kb on - strand at 3660.668 kb on - strand at 3660.701 kb on + strand at 3660.701 kb on + strand at 3660.702 kb on - strand at 3660.748 kb on + strand at 3660.748 kb on + strand at 3660.748 kb on + strand at 3660.748 kb on + strand at 3660.748 kb on + strand at 3660.748 kb on + strand at 3660.749 kb on - strand at 3660.749 kb on - strand at 3660.756 kb on + strand at 3661.162 kb on + strand at 3661.162 kb on + strand at 3661.162 kb on + strand at 3661.163 kb on - strand at 3661.163 kb on - strand at 3661.163 kb on - strand at 3661.163 kb on - strand at 3661.467 kb on + strand at 3661.467 kb on + strand at 3661.494 kb on + strand at 3661.495 kb on - strand at 3661.526 kb on - strand at 3661.593 kb on + strand at 3661.767 kb on + strand, within ABZR86_RS16215 at 3661.767 kb on + strand, within ABZR86_RS16215 at 3661.767 kb on + strand, within ABZR86_RS16215 at 3661.767 kb on + strand, within ABZR86_RS16215 at 3661.767 kb on + strand, within ABZR86_RS16215 at 3661.767 kb on + strand, within ABZR86_RS16215 at 3661.843 kb on + strand, within ABZR86_RS16215 at 3661.951 kb on - strand, within ABZR86_RS16215 at 3661.951 kb on - strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.070 kb on + strand, within ABZR86_RS16215 at 3662.071 kb on - strand, within ABZR86_RS16215 at 3662.071 kb on - strand, within ABZR86_RS16215 at 3662.071 kb on - strand, within ABZR86_RS16215 at 3662.071 kb on - strand, within ABZR86_RS16215 at 3662.071 kb on - strand, within ABZR86_RS16215 at 3662.118 kb on + strand, within ABZR86_RS16215 at 3662.119 kb on - strand, within ABZR86_RS16215 at 3662.119 kb on - strand, within ABZR86_RS16215
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 3,659,962 + ABZR86_RS16205 0.21 +0.2 3,659,962 + ABZR86_RS16205 0.21 +0.6 3,659,962 + ABZR86_RS16205 0.21 +0.1 3,659,962 + ABZR86_RS16205 0.21 +1.2 3,659,962 + ABZR86_RS16205 0.21 +1.0 3,659,963 - ABZR86_RS16205 0.21 -2.2 3,659,963 - ABZR86_RS16205 0.21 +0.7 3,659,963 - ABZR86_RS16205 0.21 +0.3 3,659,963 - ABZR86_RS16205 0.21 +1.2 3,659,965 + ABZR86_RS16205 0.22 -0.3 3,659,966 - ABZR86_RS16205 0.22 -0.0 3,660,121 + ABZR86_RS16205 0.39 -0.7 3,660,160 + ABZR86_RS16205 0.43 +0.4 3,660,161 - ABZR86_RS16205 0.43 +0.9 3,660,161 - ABZR86_RS16205 0.43 +0.2 3,660,280 + ABZR86_RS16205 0.57 -0.2 3,660,454 + ABZR86_RS16205 0.76 -0.1 3,660,454 + ABZR86_RS16205 0.76 -0.2 3,660,455 - ABZR86_RS16205 0.76 -0.3 3,660,455 - ABZR86_RS16205 0.76 +0.4 3,660,455 - ABZR86_RS16205 0.76 -0.4 3,660,589 + +0.5 3,660,589 + +0.8 3,660,589 + -0.4 3,660,590 - -0.9 3,660,590 - -0.6 3,660,667 + -0.1 3,660,668 - +0.7 3,660,668 - +1.0 3,660,668 - +0.1 3,660,701 + -0.1 3,660,701 + -0.2 3,660,702 - -0.3 3,660,748 + +0.9 3,660,748 + -0.1 3,660,748 + +0.2 3,660,748 + +0.1 3,660,748 + +0.6 3,660,748 + +1.0 3,660,749 - +0.7 3,660,749 - +0.2 3,660,756 + +1.2 3,661,162 + +0.2 3,661,162 + -0.5 3,661,162 + -0.7 3,661,163 - +1.1 3,661,163 - -0.5 3,661,163 - -0.3 3,661,163 - -1.0 3,661,467 + -0.7 3,661,467 + -0.5 3,661,494 + +0.3 3,661,495 - +1.2 3,661,526 - +0.1 3,661,593 + +0.0 3,661,767 + ABZR86_RS16215 0.17 +1.8 3,661,767 + ABZR86_RS16215 0.17 +0.1 3,661,767 + ABZR86_RS16215 0.17 -0.5 3,661,767 + ABZR86_RS16215 0.17 +1.0 3,661,767 + ABZR86_RS16215 0.17 +0.3 3,661,767 + ABZR86_RS16215 0.17 -0.2 3,661,843 + ABZR86_RS16215 0.21 +0.4 3,661,951 - ABZR86_RS16215 0.25 -0.7 3,661,951 - ABZR86_RS16215 0.25 +0.1 3,662,070 + ABZR86_RS16215 0.30 +0.5 3,662,070 + ABZR86_RS16215 0.30 -0.2 3,662,070 + ABZR86_RS16215 0.30 +0.5 3,662,070 + ABZR86_RS16215 0.30 -0.0 3,662,070 + ABZR86_RS16215 0.30 +0.4 3,662,070 + ABZR86_RS16215 0.30 +0.0 3,662,070 + ABZR86_RS16215 0.30 +2.0 3,662,071 - ABZR86_RS16215 0.30 -0.3 3,662,071 - ABZR86_RS16215 0.30 -0.3 3,662,071 - ABZR86_RS16215 0.30 +1.4 3,662,071 - ABZR86_RS16215 0.30 -0.1 3,662,071 - ABZR86_RS16215 0.30 +0.9 3,662,118 + ABZR86_RS16215 0.32 +1.9 3,662,119 - ABZR86_RS16215 0.32 +0.2 3,662,119 - ABZR86_RS16215 0.32 -0.2
Or see this region's nucleotide sequence