Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07215 and ABZR86_RS07220 are separated by 173 nucleotides ABZR86_RS07220 and ABZR86_RS07225 are separated by 193 nucleotides ABZR86_RS07225 and ABZR86_RS07230 are separated by 15 nucleotides ABZR86_RS07230 and ABZR86_RS07235 are separated by 88 nucleotides ABZR86_RS07235 and ABZR86_RS07240 are separated by 79 nucleotides
ABZR86_RS07215: ABZR86_RS07215 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,590,110 to 1,590,883
_RS07215
ABZR86_RS07220: ABZR86_RS07220 - cation:proton antiporter, at 1,591,057 to 1,592,823
_RS07220
ABZR86_RS07225: ABZR86_RS07225 - tRNA-Ala, at 1,593,017 to 1,593,092
_RS07225
ABZR86_RS07230: ABZR86_RS07230 - tRNA-Glu, at 1,593,108 to 1,593,183
_RS07230
ABZR86_RS07235: ABZR86_RS07235 - tRNA-Asp, at 1,593,272 to 1,593,348
_RS07235
ABZR86_RS07240: ABZR86_RS07240 - DUF1249 domain-containing protein, at 1,593,428 to 1,593,928
_RS07240
Position (kb) 1591
1592
1593 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1590.111 kb on + strand at 1590.111 kb on + strand at 1590.112 kb on - strand at 1590.112 kb on - strand at 1590.112 kb on - strand at 1590.112 kb on - strand at 1590.229 kb on - strand, within ABZR86_RS07215 at 1590.258 kb on + strand, within ABZR86_RS07215 at 1590.259 kb on - strand, within ABZR86_RS07215 at 1590.399 kb on + strand, within ABZR86_RS07215 at 1590.399 kb on + strand, within ABZR86_RS07215 at 1590.399 kb on + strand, within ABZR86_RS07215 at 1590.519 kb on + strand, within ABZR86_RS07215 at 1590.520 kb on - strand, within ABZR86_RS07215 at 1590.562 kb on - strand, within ABZR86_RS07215 at 1590.562 kb on - strand, within ABZR86_RS07215 at 1590.748 kb on - strand, within ABZR86_RS07215 at 1590.978 kb on + strand at 1590.978 kb on + strand at 1590.978 kb on + strand at 1590.978 kb on + strand at 1590.979 kb on - strand at 1590.979 kb on - strand at 1590.979 kb on - strand at 1591.011 kb on + strand at 1591.011 kb on + strand at 1591.011 kb on + strand at 1591.012 kb on - strand at 1591.012 kb on - strand at 1591.012 kb on - strand at 1591.012 kb on - strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.373 kb on + strand, within ABZR86_RS07220 at 1591.484 kb on + strand, within ABZR86_RS07220 at 1591.485 kb on - strand, within ABZR86_RS07220 at 1591.485 kb on - strand, within ABZR86_RS07220 at 1591.485 kb on - strand, within ABZR86_RS07220 at 1591.490 kb on + strand, within ABZR86_RS07220 at 1591.491 kb on - strand, within ABZR86_RS07220 at 1591.491 kb on - strand, within ABZR86_RS07220 at 1591.491 kb on - strand, within ABZR86_RS07220 at 1591.617 kb on + strand, within ABZR86_RS07220 at 1591.617 kb on + strand, within ABZR86_RS07220 at 1591.617 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.700 kb on + strand, within ABZR86_RS07220 at 1591.701 kb on - strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.708 kb on - strand, within ABZR86_RS07220 at 1591.708 kb on - strand, within ABZR86_RS07220 at 1591.748 kb on + strand, within ABZR86_RS07220 at 1591.765 kb on + strand, within ABZR86_RS07220 at 1591.766 kb on - strand, within ABZR86_RS07220 at 1591.875 kb on + strand, within ABZR86_RS07220 at 1591.876 kb on - strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.913 kb on - strand, within ABZR86_RS07220 at 1591.913 kb on - strand, within ABZR86_RS07220 at 1591.944 kb on - strand, within ABZR86_RS07220 at 1591.944 kb on - strand, within ABZR86_RS07220 at 1591.944 kb on - strand, within ABZR86_RS07220 at 1592.102 kb on + strand, within ABZR86_RS07220 at 1592.102 kb on + strand, within ABZR86_RS07220 at 1592.103 kb on - strand, within ABZR86_RS07220 at 1592.103 kb on - strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.690 kb on + strand at 1592.690 kb on + strand at 1592.690 kb on + strand at 1592.720 kb on + strand at 1592.720 kb on + strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.854 kb on + strand at 1592.854 kb on + strand at 1592.855 kb on - strand at 1592.855 kb on - strand at 1592.855 kb on - strand at 1592.881 kb on + strand at 1592.881 kb on + strand at 1592.882 kb on - strand at 1592.882 kb on - strand at 1593.095 kb on + strand at 1593.246 kb on + strand at 1593.292 kb on + strand, within ABZR86_RS07235 at 1593.429 kb on + strand at 1593.429 kb on + strand at 1593.429 kb on + strand at 1593.430 kb on - strand at 1593.430 kb on - strand at 1593.430 kb on - strand at 1593.517 kb on - strand, within ABZR86_RS07240 at 1593.517 kb on - strand, within ABZR86_RS07240 at 1593.517 kb on - strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.714 kb on + strand, within ABZR86_RS07240 at 1593.714 kb on + strand, within ABZR86_RS07240 at 1593.715 kb on - strand, within ABZR86_RS07240 at 1593.715 kb on - strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.737 kb on - strand, within ABZR86_RS07240 at 1593.737 kb on - strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 1,590,111 + +0.2 1,590,111 + -0.2 1,590,112 - +0.6 1,590,112 - -0.4 1,590,112 - -0.3 1,590,112 - +2.1 1,590,229 - ABZR86_RS07215 0.15 -2.3 1,590,258 + ABZR86_RS07215 0.19 -0.3 1,590,259 - ABZR86_RS07215 0.19 -0.3 1,590,399 + ABZR86_RS07215 0.37 -1.6 1,590,399 + ABZR86_RS07215 0.37 -1.1 1,590,399 + ABZR86_RS07215 0.37 +2.3 1,590,519 + ABZR86_RS07215 0.53 -1.9 1,590,520 - ABZR86_RS07215 0.53 -2.1 1,590,562 - ABZR86_RS07215 0.58 -1.9 1,590,562 - ABZR86_RS07215 0.58 -1.1 1,590,748 - ABZR86_RS07215 0.82 -0.6 1,590,978 + -1.5 1,590,978 + -0.9 1,590,978 + -0.4 1,590,978 + +0.7 1,590,979 - -0.5 1,590,979 - +2.2 1,590,979 - +0.4 1,591,011 + -0.6 1,591,011 + -0.1 1,591,011 + -0.6 1,591,012 - -0.6 1,591,012 - +0.3 1,591,012 - +0.3 1,591,012 - -0.2 1,591,013 + -0.1 1,591,013 + -0.7 1,591,013 + +0.3 1,591,013 + -1.1 1,591,013 + -0.5 1,591,013 + +0.7 1,591,014 - -0.1 1,591,014 - -0.3 1,591,014 - -0.1 1,591,014 - -0.6 1,591,014 - +1.4 1,591,014 - -0.3 1,591,014 - -0.5 1,591,014 - -0.2 1,591,014 - +0.9 1,591,014 - +0.2 1,591,373 + ABZR86_RS07220 0.18 +0.3 1,591,484 + ABZR86_RS07220 0.24 -1.4 1,591,485 - ABZR86_RS07220 0.24 -0.3 1,591,485 - ABZR86_RS07220 0.24 +0.7 1,591,485 - ABZR86_RS07220 0.24 +0.4 1,591,490 + ABZR86_RS07220 0.25 +0.1 1,591,491 - ABZR86_RS07220 0.25 -0.3 1,591,491 - ABZR86_RS07220 0.25 +0.2 1,591,491 - ABZR86_RS07220 0.25 +0.3 1,591,617 + ABZR86_RS07220 0.32 +0.2 1,591,617 + ABZR86_RS07220 0.32 +0.1 1,591,617 + ABZR86_RS07220 0.32 +0.6 1,591,619 + ABZR86_RS07220 0.32 +1.7 1,591,619 + ABZR86_RS07220 0.32 +1.1 1,591,619 + ABZR86_RS07220 0.32 +1.1 1,591,619 + ABZR86_RS07220 0.32 -0.4 1,591,619 + ABZR86_RS07220 0.32 -0.4 1,591,619 + ABZR86_RS07220 0.32 +0.7 1,591,620 - ABZR86_RS07220 0.32 -0.9 1,591,620 - ABZR86_RS07220 0.32 +0.2 1,591,620 - ABZR86_RS07220 0.32 +0.6 1,591,620 - ABZR86_RS07220 0.32 -0.2 1,591,620 - ABZR86_RS07220 0.32 -0.4 1,591,620 - ABZR86_RS07220 0.32 +0.9 1,591,620 - ABZR86_RS07220 0.32 +0.2 1,591,700 + ABZR86_RS07220 0.36 +0.3 1,591,701 - ABZR86_RS07220 0.36 -0.1 1,591,707 + ABZR86_RS07220 0.37 -0.1 1,591,707 + ABZR86_RS07220 0.37 +0.5 1,591,707 + ABZR86_RS07220 0.37 +1.1 1,591,707 + ABZR86_RS07220 0.37 -0.4 1,591,708 - ABZR86_RS07220 0.37 -0.9 1,591,708 - ABZR86_RS07220 0.37 -0.3 1,591,748 + ABZR86_RS07220 0.39 +0.2 1,591,765 + ABZR86_RS07220 0.40 -0.9 1,591,766 - ABZR86_RS07220 0.40 +0.1 1,591,875 + ABZR86_RS07220 0.46 +0.1 1,591,876 - ABZR86_RS07220 0.46 -0.2 1,591,912 + ABZR86_RS07220 0.48 -0.3 1,591,912 + ABZR86_RS07220 0.48 +0.5 1,591,912 + ABZR86_RS07220 0.48 -0.3 1,591,912 + ABZR86_RS07220 0.48 +0.6 1,591,913 - ABZR86_RS07220 0.48 +0.7 1,591,913 - ABZR86_RS07220 0.48 +0.1 1,591,944 - ABZR86_RS07220 0.50 +1.2 1,591,944 - ABZR86_RS07220 0.50 +0.1 1,591,944 - ABZR86_RS07220 0.50 +1.6 1,592,102 + ABZR86_RS07220 0.59 +0.7 1,592,102 + ABZR86_RS07220 0.59 +0.1 1,592,103 - ABZR86_RS07220 0.59 +1.6 1,592,103 - ABZR86_RS07220 0.59 +0.3 1,592,192 + ABZR86_RS07220 0.64 +1.0 1,592,192 + ABZR86_RS07220 0.64 -0.3 1,592,192 + ABZR86_RS07220 0.64 -0.3 1,592,192 + ABZR86_RS07220 0.64 +0.5 1,592,192 + ABZR86_RS07220 0.64 +0.7 1,592,192 + ABZR86_RS07220 0.64 -1.1 1,592,192 + ABZR86_RS07220 0.64 +0.2 1,592,193 - ABZR86_RS07220 0.64 +0.3 1,592,193 - ABZR86_RS07220 0.64 -0.1 1,592,193 - ABZR86_RS07220 0.64 -0.3 1,592,193 - ABZR86_RS07220 0.64 -0.4 1,592,193 - ABZR86_RS07220 0.64 +0.2 1,592,193 - ABZR86_RS07220 0.64 +0.2 1,592,193 - ABZR86_RS07220 0.64 -1.3 1,592,193 - ABZR86_RS07220 0.64 +0.5 1,592,193 - ABZR86_RS07220 0.64 -0.6 1,592,690 + +2.3 1,592,690 + -0.0 1,592,690 + +0.7 1,592,720 + -1.9 1,592,720 + +0.7 1,592,721 - +0.1 1,592,721 - +0.8 1,592,721 - -0.0 1,592,721 - +0.3 1,592,721 - -0.1 1,592,854 + +0.4 1,592,854 + -0.7 1,592,855 - -0.1 1,592,855 - -1.1 1,592,855 - -0.1 1,592,881 + -0.8 1,592,881 + -0.1 1,592,882 - -0.5 1,592,882 - -0.5 1,593,095 + -0.1 1,593,246 + -0.5 1,593,292 + ABZR86_RS07235 0.26 -1.8 1,593,429 + -1.1 1,593,429 + +0.2 1,593,429 + +0.1 1,593,430 - +0.1 1,593,430 - -0.6 1,593,430 - -0.2 1,593,517 - ABZR86_RS07240 0.18 -0.0 1,593,517 - ABZR86_RS07240 0.18 -0.3 1,593,517 - ABZR86_RS07240 0.18 -0.2 1,593,657 + ABZR86_RS07240 0.46 -0.4 1,593,657 + ABZR86_RS07240 0.46 +0.1 1,593,657 + ABZR86_RS07240 0.46 -0.0 1,593,657 + ABZR86_RS07240 0.46 +0.4 1,593,657 + ABZR86_RS07240 0.46 -0.3 1,593,657 + ABZR86_RS07240 0.46 -0.3 1,593,657 + ABZR86_RS07240 0.46 -0.2 1,593,658 - ABZR86_RS07240 0.46 +0.4 1,593,658 - ABZR86_RS07240 0.46 -0.1 1,593,658 - ABZR86_RS07240 0.46 +0.6 1,593,658 - ABZR86_RS07240 0.46 +0.2 1,593,658 - ABZR86_RS07240 0.46 -3.7 1,593,658 - ABZR86_RS07240 0.46 +0.7 1,593,714 + ABZR86_RS07240 0.57 +1.7 1,593,714 + ABZR86_RS07240 0.57 +0.2 1,593,715 - ABZR86_RS07240 0.57 +1.1 1,593,715 - ABZR86_RS07240 0.57 +0.3 1,593,736 + ABZR86_RS07240 0.61 +0.6 1,593,736 + ABZR86_RS07240 0.61 -0.1 1,593,736 + ABZR86_RS07240 0.61 -1.7 1,593,736 + ABZR86_RS07240 0.61 -0.3 1,593,736 + ABZR86_RS07240 0.61 -0.3 1,593,736 + ABZR86_RS07240 0.61 +0.2 1,593,737 - ABZR86_RS07240 0.62 +0.2 1,593,737 - ABZR86_RS07240 0.62 -0.6 1,593,738 + ABZR86_RS07240 0.62 +0.2 1,593,738 + ABZR86_RS07240 0.62 -0.2 1,593,738 + ABZR86_RS07240 0.62 -0.1 1,593,738 + ABZR86_RS07240 0.62 +0.5 1,593,739 - ABZR86_RS07240 0.62 -1.9 1,593,739 - ABZR86_RS07240 0.62 +0.3 1,593,739 - ABZR86_RS07240 0.62 -0.5 1,593,739 - ABZR86_RS07240 0.62 +0.4 1,593,739 - ABZR86_RS07240 0.62 +0.2 1,593,739 - ABZR86_RS07240 0.62 +0.4 1,593,739 - ABZR86_RS07240 0.62 -1.8 1,593,798 + ABZR86_RS07240 0.74 +0.4 1,593,798 + ABZR86_RS07240 0.74 -0.0 1,593,798 + ABZR86_RS07240 0.74 -0.9 1,593,798 + ABZR86_RS07240 0.74 -0.2 1,593,798 + ABZR86_RS07240 0.74 -0.6 1,593,798 + ABZR86_RS07240 0.74 -0.4 1,593,798 + ABZR86_RS07240 0.74 -0.6 1,593,798 + ABZR86_RS07240 0.74 +0.0 1,593,798 + ABZR86_RS07240 0.74 +0.2 1,593,798 + ABZR86_RS07240 0.74 -1.1 1,593,798 + ABZR86_RS07240 0.74 -0.3 1,593,798 + ABZR86_RS07240 0.74 -0.1 1,593,798 + ABZR86_RS07240 0.74 -0.3 1,593,798 + ABZR86_RS07240 0.74 +0.0 1,593,798 + ABZR86_RS07240 0.74 +0.6 1,593,798 + ABZR86_RS07240 0.74 +0.5 1,593,799 - ABZR86_RS07240 0.74 +0.1 1,593,799 - ABZR86_RS07240 0.74 +0.5 1,593,799 - ABZR86_RS07240 0.74 +0.3 1,593,799 - ABZR86_RS07240 0.74 -0.1 1,593,799 - ABZR86_RS07240 0.74 +0.3 1,593,799 - ABZR86_RS07240 0.74 +1.2 1,593,799 - ABZR86_RS07240 0.74 +0.3 1,593,799 - ABZR86_RS07240 0.74 +0.4 1,593,799 - ABZR86_RS07240 0.74 -0.1 1,593,799 - ABZR86_RS07240 0.74 -0.3 1,593,799 - ABZR86_RS07240 0.74 +0.4 1,593,799 - ABZR86_RS07240 0.74 +1.3
Or see this region's nucleotide sequence