Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00770 and ABZR86_RS00775 are separated by 157 nucleotides ABZR86_RS00775 and ABZR86_RS00780 are separated by 294 nucleotides ABZR86_RS00780 and ABZR86_RS00785 are separated by 125 nucleotides
ABZR86_RS00770: ABZR86_RS00770 - PhoH family protein, at 150,990 to 152,369
_RS00770
ABZR86_RS00775: ABZR86_RS00775 - peroxiredoxin, at 152,527 to 152,988
_RS00775
ABZR86_RS00780: ABZR86_RS00780 - glycine cleavage system protein R, at 153,283 to 153,837
_RS00780
ABZR86_RS00785: ABZR86_RS00785 - 4-hydroxy-tetrahydrodipicolinate synthase, at 153,963 to 154,856
_RS00785
Position (kb) 153
154 Strain fitness (log2 ratio) -2
-1
0
1
2 at 152.347 kb on + strand at 152.348 kb on - strand at 152.348 kb on - strand at 152.348 kb on - strand at 152.348 kb on - strand at 152.348 kb on - strand at 152.348 kb on - strand at 152.369 kb on + strand at 152.371 kb on - strand at 152.514 kb on - strand at 152.573 kb on - strand at 152.628 kb on + strand, within ABZR86_RS00775 at 152.628 kb on + strand, within ABZR86_RS00775 at 152.629 kb on - strand, within ABZR86_RS00775 at 152.629 kb on - strand, within ABZR86_RS00775 at 152.629 kb on - strand, within ABZR86_RS00775 at 152.629 kb on - strand, within ABZR86_RS00775 at 152.636 kb on - strand, within ABZR86_RS00775 at 152.636 kb on - strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.888 kb on + strand, within ABZR86_RS00775 at 152.889 kb on - strand, within ABZR86_RS00775 at 152.889 kb on - strand, within ABZR86_RS00775 at 152.889 kb on - strand, within ABZR86_RS00775 at 152.889 kb on - strand, within ABZR86_RS00775 at 152.889 kb on - strand, within ABZR86_RS00775 at 152.889 kb on - strand, within ABZR86_RS00775 at 152.896 kb on + strand, within ABZR86_RS00775 at 152.896 kb on + strand, within ABZR86_RS00775 at 152.896 kb on + strand, within ABZR86_RS00775 at 153.141 kb on - strand at 153.284 kb on + strand at 153.284 kb on + strand at 153.284 kb on + strand at 153.284 kb on + strand at 153.284 kb on + strand at 153.284 kb on + strand at 153.284 kb on + strand at 153.285 kb on - strand at 153.285 kb on - strand at 153.285 kb on - strand at 153.285 kb on - strand at 153.285 kb on - strand at 153.285 kb on - strand at 153.434 kb on + strand, within ABZR86_RS00780 at 153.539 kb on + strand, within ABZR86_RS00780 at 153.539 kb on + strand, within ABZR86_RS00780 at 153.539 kb on + strand, within ABZR86_RS00780 at 153.581 kb on + strand, within ABZR86_RS00780 at 153.581 kb on + strand, within ABZR86_RS00780 at 153.582 kb on - strand, within ABZR86_RS00780 at 153.582 kb on - strand, within ABZR86_RS00780 at 153.819 kb on + strand at 153.900 kb on + strand at 153.900 kb on + strand at 153.900 kb on + strand at 153.900 kb on + strand at 153.900 kb on + strand at 153.900 kb on + strand at 153.900 kb on + strand at 153.901 kb on - strand at 153.927 kb on + strand at 153.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 152,347 + -1.3 152,348 - -0.9 152,348 - -1.6 152,348 - -0.4 152,348 - +0.5 152,348 - -0.1 152,348 - -0.2 152,369 + -1.0 152,371 - -0.8 152,514 - -0.1 152,573 - +0.0 152,628 + ABZR86_RS00775 0.22 -0.8 152,628 + ABZR86_RS00775 0.22 -0.7 152,629 - ABZR86_RS00775 0.22 +1.5 152,629 - ABZR86_RS00775 0.22 +2.3 152,629 - ABZR86_RS00775 0.22 +0.2 152,629 - ABZR86_RS00775 0.22 +0.3 152,636 - ABZR86_RS00775 0.24 +0.3 152,636 - ABZR86_RS00775 0.24 -0.3 152,888 + ABZR86_RS00775 0.78 -0.9 152,888 + ABZR86_RS00775 0.78 -1.9 152,888 + ABZR86_RS00775 0.78 -1.2 152,888 + ABZR86_RS00775 0.78 -1.5 152,888 + ABZR86_RS00775 0.78 -0.9 152,888 + ABZR86_RS00775 0.78 -2.0 152,888 + ABZR86_RS00775 0.78 -1.0 152,888 + ABZR86_RS00775 0.78 -2.5 152,888 + ABZR86_RS00775 0.78 -0.4 152,888 + ABZR86_RS00775 0.78 -0.4 152,889 - ABZR86_RS00775 0.78 +0.3 152,889 - ABZR86_RS00775 0.78 -0.9 152,889 - ABZR86_RS00775 0.78 -0.4 152,889 - ABZR86_RS00775 0.78 +0.2 152,889 - ABZR86_RS00775 0.78 -1.6 152,889 - ABZR86_RS00775 0.78 -1.0 152,896 + ABZR86_RS00775 0.80 -0.4 152,896 + ABZR86_RS00775 0.80 -0.7 152,896 + ABZR86_RS00775 0.80 -1.4 153,141 - -0.1 153,284 + -0.0 153,284 + +0.7 153,284 + -0.0 153,284 + -0.5 153,284 + +0.7 153,284 + +0.2 153,284 + +0.1 153,285 - -0.0 153,285 - +1.1 153,285 - +0.1 153,285 - -0.2 153,285 - +2.0 153,285 - -0.7 153,434 + ABZR86_RS00780 0.27 +0.2 153,539 + ABZR86_RS00780 0.46 +0.3 153,539 + ABZR86_RS00780 0.46 +0.7 153,539 + ABZR86_RS00780 0.46 -0.4 153,581 + ABZR86_RS00780 0.54 -0.1 153,581 + ABZR86_RS00780 0.54 +0.9 153,582 - ABZR86_RS00780 0.54 -0.5 153,582 - ABZR86_RS00780 0.54 -0.2 153,819 + +0.6 153,900 + -0.2 153,900 + -1.0 153,900 + +0.7 153,900 + +0.1 153,900 + +0.6 153,900 + +0.7 153,900 + -0.3 153,901 - -0.6 153,927 + -0.2 153,928 - -0.2
Or see this region's nucleotide sequence