Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00630 and ABZR86_RS00635 are separated by 265 nucleotides ABZR86_RS00635 and ABZR86_RS00640 overlap by 13 nucleotides ABZR86_RS00640 and ABZR86_RS00645 overlap by 1 nucleotides
ABZR86_RS00630: ABZR86_RS00630 - DNA mismatch repair protein MutS, at 120,955 to 123,528
_RS00630
ABZR86_RS00635: ABZR86_RS00635 - DUF535 family protein, at 123,794 to 124,831
_RS00635
ABZR86_RS00640: ABZR86_RS00640 - sigma-70 family RNA polymerase sigma factor, at 124,819 to 125,370
_RS00640
ABZR86_RS00645: ABZR86_RS00645 - FecR domain-containing protein, at 125,370 to 126,341
_RS00645
Position (kb) 123
124
125 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 122.804 kb on + strand, within ABZR86_RS00630 at 122.804 kb on + strand, within ABZR86_RS00630 at 122.804 kb on + strand, within ABZR86_RS00630 at 122.805 kb on - strand, within ABZR86_RS00630 at 122.805 kb on - strand, within ABZR86_RS00630 at 122.805 kb on - strand, within ABZR86_RS00630 at 123.105 kb on - strand, within ABZR86_RS00630 at 123.105 kb on - strand, within ABZR86_RS00630 at 123.105 kb on - strand, within ABZR86_RS00630 at 123.105 kb on - strand, within ABZR86_RS00630 at 123.299 kb on + strand at 123.299 kb on + strand at 123.299 kb on + strand at 123.299 kb on + strand at 123.299 kb on + strand at 123.299 kb on + strand at 123.300 kb on - strand at 123.300 kb on - strand at 123.317 kb on + strand at 123.318 kb on - strand at 123.413 kb on + strand at 123.413 kb on + strand at 123.425 kb on + strand at 123.425 kb on + strand at 123.425 kb on + strand at 123.426 kb on - strand at 123.426 kb on - strand at 123.485 kb on + strand at 123.735 kb on + strand at 123.735 kb on + strand at 123.735 kb on + strand at 123.736 kb on - strand at 123.932 kb on + strand, within ABZR86_RS00635 at 123.932 kb on + strand, within ABZR86_RS00635 at 123.932 kb on + strand, within ABZR86_RS00635 at 123.932 kb on + strand, within ABZR86_RS00635 at 123.933 kb on - strand, within ABZR86_RS00635 at 123.933 kb on - strand, within ABZR86_RS00635 at 123.933 kb on - strand, within ABZR86_RS00635 at 123.933 kb on - strand, within ABZR86_RS00635 at 123.933 kb on - strand, within ABZR86_RS00635 at 123.967 kb on + strand, within ABZR86_RS00635 at 123.975 kb on - strand, within ABZR86_RS00635 at 124.112 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.160 kb on + strand, within ABZR86_RS00635 at 124.161 kb on - strand, within ABZR86_RS00635 at 124.161 kb on - strand, within ABZR86_RS00635 at 124.161 kb on - strand, within ABZR86_RS00635 at 124.161 kb on - strand, within ABZR86_RS00635 at 124.301 kb on + strand, within ABZR86_RS00635 at 124.302 kb on - strand, within ABZR86_RS00635 at 124.302 kb on - strand, within ABZR86_RS00635 at 124.302 kb on - strand, within ABZR86_RS00635 at 124.553 kb on + strand, within ABZR86_RS00635 at 124.553 kb on + strand, within ABZR86_RS00635 at 124.553 kb on + strand, within ABZR86_RS00635 at 124.554 kb on - strand, within ABZR86_RS00635 at 124.554 kb on - strand, within ABZR86_RS00635 at 124.554 kb on - strand, within ABZR86_RS00635 at 124.981 kb on + strand, within ABZR86_RS00640 at 124.981 kb on + strand, within ABZR86_RS00640 at 124.981 kb on + strand, within ABZR86_RS00640 at 124.981 kb on + strand, within ABZR86_RS00640 at 124.981 kb on + strand, within ABZR86_RS00640 at 124.981 kb on + strand, within ABZR86_RS00640 at 124.982 kb on - strand, within ABZR86_RS00640 at 124.982 kb on - strand, within ABZR86_RS00640 at 124.982 kb on - strand, within ABZR86_RS00640 at 124.982 kb on - strand, within ABZR86_RS00640 at 125.035 kb on + strand, within ABZR86_RS00640 at 125.035 kb on + strand, within ABZR86_RS00640 at 125.035 kb on + strand, within ABZR86_RS00640 at 125.036 kb on - strand, within ABZR86_RS00640 at 125.036 kb on - strand, within ABZR86_RS00640 at 125.036 kb on - strand, within ABZR86_RS00640 at 125.707 kb on - strand, within ABZR86_RS00645
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 122,804 + ABZR86_RS00630 0.72 -0.1 122,804 + ABZR86_RS00630 0.72 +1.1 122,804 + ABZR86_RS00630 0.72 +0.2 122,805 - ABZR86_RS00630 0.72 +0.9 122,805 - ABZR86_RS00630 0.72 -0.1 122,805 - ABZR86_RS00630 0.72 -0.2 123,105 - ABZR86_RS00630 0.84 -0.4 123,105 - ABZR86_RS00630 0.84 +0.6 123,105 - ABZR86_RS00630 0.84 -0.0 123,105 - ABZR86_RS00630 0.84 -0.3 123,299 + +0.0 123,299 + +0.4 123,299 + +0.2 123,299 + -0.5 123,299 + +0.0 123,299 + -0.6 123,300 - -1.1 123,300 - +0.7 123,317 + -0.3 123,318 - +0.9 123,413 + +0.8 123,413 + -0.5 123,425 + +0.0 123,425 + +0.1 123,425 + -0.1 123,426 - +1.3 123,426 - +0.9 123,485 + -0.7 123,735 + +0.1 123,735 + -0.4 123,735 + -1.0 123,736 - -1.3 123,932 + ABZR86_RS00635 0.13 -0.1 123,932 + ABZR86_RS00635 0.13 +0.9 123,932 + ABZR86_RS00635 0.13 -1.5 123,932 + ABZR86_RS00635 0.13 -0.8 123,933 - ABZR86_RS00635 0.13 -1.0 123,933 - ABZR86_RS00635 0.13 -2.5 123,933 - ABZR86_RS00635 0.13 -3.1 123,933 - ABZR86_RS00635 0.13 -2.0 123,933 - ABZR86_RS00635 0.13 +0.1 123,967 + ABZR86_RS00635 0.17 -1.3 123,975 - ABZR86_RS00635 0.17 -0.9 124,112 + ABZR86_RS00635 0.31 +0.4 124,160 + ABZR86_RS00635 0.35 +0.7 124,160 + ABZR86_RS00635 0.35 -1.1 124,160 + ABZR86_RS00635 0.35 -0.4 124,160 + ABZR86_RS00635 0.35 -0.1 124,160 + ABZR86_RS00635 0.35 -0.4 124,160 + ABZR86_RS00635 0.35 +1.4 124,160 + ABZR86_RS00635 0.35 +0.3 124,160 + ABZR86_RS00635 0.35 -0.3 124,161 - ABZR86_RS00635 0.35 -0.8 124,161 - ABZR86_RS00635 0.35 -0.1 124,161 - ABZR86_RS00635 0.35 +0.0 124,161 - ABZR86_RS00635 0.35 -0.4 124,301 + ABZR86_RS00635 0.49 +0.5 124,302 - ABZR86_RS00635 0.49 -1.4 124,302 - ABZR86_RS00635 0.49 -0.2 124,302 - ABZR86_RS00635 0.49 -0.7 124,553 + ABZR86_RS00635 0.73 +1.4 124,553 + ABZR86_RS00635 0.73 -0.1 124,553 + ABZR86_RS00635 0.73 -0.2 124,554 - ABZR86_RS00635 0.73 -0.3 124,554 - ABZR86_RS00635 0.73 -0.8 124,554 - ABZR86_RS00635 0.73 -0.3 124,981 + ABZR86_RS00640 0.29 +1.2 124,981 + ABZR86_RS00640 0.29 +0.2 124,981 + ABZR86_RS00640 0.29 -0.5 124,981 + ABZR86_RS00640 0.29 -0.1 124,981 + ABZR86_RS00640 0.29 +0.1 124,981 + ABZR86_RS00640 0.29 +0.6 124,982 - ABZR86_RS00640 0.30 -0.2 124,982 - ABZR86_RS00640 0.30 -1.3 124,982 - ABZR86_RS00640 0.30 -0.6 124,982 - ABZR86_RS00640 0.30 -0.4 125,035 + ABZR86_RS00640 0.39 -0.4 125,035 + ABZR86_RS00640 0.39 -0.1 125,035 + ABZR86_RS00640 0.39 +0.3 125,036 - ABZR86_RS00640 0.39 +0.2 125,036 - ABZR86_RS00640 0.39 -0.7 125,036 - ABZR86_RS00640 0.39 -0.2 125,707 - ABZR86_RS00645 0.35 -0.2
Or see this region's nucleotide sequence