Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2956
Experiment: MoYLS4 with Polymyxin B sulfate 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,727,562 | - | +0.1 | |||
3,727,594 | + | -1.3 | |||
3,727,940 | - | DvMF_2955 | 0.34 | -0.8 | |
3,727,975 | - | DvMF_2955 | 0.38 | -0.7 | |
3,728,153 | + | DvMF_2955 | 0.62 | -2.1 | |
3,728,234 | - | DvMF_2955 | 0.73 | -0.8 | |
3,728,639 | - | DvMF_2956 | 0.14 | -2.1 | |
3,728,801 | - | DvMF_2956 | 0.27 | -1.7 | |
3,728,811 | - | DvMF_2956 | 0.28 | -0.6 | |
3,728,967 | - | DvMF_2956 | 0.40 | -2.1 | |
3,729,001 | - | DvMF_2956 | 0.42 | -1.0 | |
3,729,003 | - | DvMF_2956 | 0.43 | -3.9 | |
3,729,017 | - | DvMF_2956 | 0.44 | -2.3 | |
3,729,190 | + | DvMF_2956 | 0.57 | -1.8 | |
3,729,260 | + | DvMF_2956 | 0.62 | +0.6 | |
3,729,318 | - | DvMF_2956 | 0.67 | -0.8 | |
3,729,390 | - | DvMF_2956 | 0.73 | -0.9 | |
3,729,416 | + | DvMF_2956 | 0.75 | -1.3 | |
3,729,424 | - | DvMF_2956 | 0.75 | -0.3 | |
3,729,965 | - | -1.0 | |||
3,730,478 | + | DvMF_2957 | 0.37 | +0.1 |
Or see this region's nucleotide sequence