Experiment: MoYLS4 with Polymyxin B sulfate 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2726 and DvMF_2727 are separated by 144 nucleotides DvMF_2727 and DvMF_2728 are separated by 45 nucleotides
DvMF_2726: DvMF_2726 - ParB domain protein nuclease (RefSeq), at 3,449,917 to 3,450,681
_2726
DvMF_2727: DvMF_2727 - Recombinase (RefSeq), at 3,450,826 to 3,452,598
_2727
DvMF_2728: DvMF_2728 - magnesium chelatase ChlI subunit (RefSeq), at 3,452,644 to 3,453,618
_2728
Position (kb)
3450
3451
3452
3453 Strain fitness (log2 ratio)
-2
-1
0
1 at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.839 kb on + strand at 3449.847 kb on - strand at 3449.894 kb on + strand at 3450.871 kb on - strand at 3451.321 kb on - strand, within DvMF_2727 at 3451.396 kb on - strand, within DvMF_2727 at 3451.396 kb on - strand, within DvMF_2727 at 3451.586 kb on + strand, within DvMF_2727 at 3451.685 kb on + strand, within DvMF_2727 at 3451.806 kb on + strand, within DvMF_2727 at 3451.813 kb on + strand, within DvMF_2727 at 3452.003 kb on + strand, within DvMF_2727 at 3452.003 kb on + strand, within DvMF_2727 at 3452.003 kb on + strand, within DvMF_2727 at 3452.011 kb on - strand, within DvMF_2727 at 3452.328 kb on + strand, within DvMF_2727 at 3452.455 kb on + strand at 3452.469 kb on - strand at 3452.497 kb on - strand at 3452.518 kb on - strand at 3452.534 kb on - strand at 3452.600 kb on + strand at 3452.814 kb on + strand, within DvMF_2728 at 3452.814 kb on + strand, within DvMF_2728 at 3453.289 kb on - strand, within DvMF_2728 at 3453.388 kb on - strand, within DvMF_2728 at 3453.558 kb on - strand at 3453.588 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.25 mg/ml remove 3,449,839 + -0.6 3,449,839 + -0.6 3,449,839 + -0.2 3,449,839 + -0.8 3,449,839 + -0.2 3,449,839 + -1.6 3,449,847 - -0.0 3,449,894 + +0.1 3,450,871 - +0.0 3,451,321 - DvMF_2727 0.28 +0.5 3,451,396 - DvMF_2727 0.32 -0.3 3,451,396 - DvMF_2727 0.32 -0.5 3,451,586 + DvMF_2727 0.43 +0.9 3,451,685 + DvMF_2727 0.48 -2.0 3,451,806 + DvMF_2727 0.55 -1.7 3,451,813 + DvMF_2727 0.56 +0.2 3,452,003 + DvMF_2727 0.66 -0.5 3,452,003 + DvMF_2727 0.66 -0.7 3,452,003 + DvMF_2727 0.66 -0.3 3,452,011 - DvMF_2727 0.67 -0.4 3,452,328 + DvMF_2727 0.85 -0.2 3,452,455 + -0.2 3,452,469 - +0.1 3,452,497 - -1.1 3,452,518 - +0.1 3,452,534 - -1.1 3,452,600 + -1.0 3,452,814 + DvMF_2728 0.17 -1.0 3,452,814 + DvMF_2728 0.17 -0.9 3,453,289 - DvMF_2728 0.66 -1.0 3,453,388 - DvMF_2728 0.76 -0.8 3,453,558 - +0.3 3,453,588 - +0.2
Or see this region's nucleotide sequence