Experiment: MoYLS4 with Polymyxin B sulfate 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1866 and DvMF_1867 are separated by 136 nucleotides DvMF_1867 and DvMF_1868 are separated by 4 nucleotides DvMF_1868 and DvMF_1869 are separated by 235 nucleotides
DvMF_1866: DvMF_1866 - DRTGG domain protein (RefSeq), at 2,290,169 to 2,291,230
_1866
DvMF_1867: DvMF_1867 - protein of unknown function DUF162 (RefSeq), at 2,291,367 to 2,291,996
_1867
DvMF_1868: DvMF_1868 - protein of unknown function DUF162 (RefSeq), at 2,292,001 to 2,294,151
_1868
DvMF_1869: DvMF_1869 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 2,294,387 to 2,296,210
_1869
Position (kb)
2292
2293
2294
2295 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2291.130 kb on + strand at 2291.138 kb on - strand at 2291.149 kb on + strand at 2291.369 kb on - strand at 2291.369 kb on - strand at 2291.537 kb on + strand, within DvMF_1867 at 2291.544 kb on + strand, within DvMF_1867 at 2291.563 kb on - strand, within DvMF_1867 at 2291.950 kb on - strand at 2292.084 kb on - strand at 2292.213 kb on + strand at 2292.221 kb on - strand, within DvMF_1868 at 2292.221 kb on - strand, within DvMF_1868 at 2292.338 kb on - strand, within DvMF_1868 at 2292.386 kb on + strand, within DvMF_1868 at 2292.736 kb on + strand, within DvMF_1868 at 2293.011 kb on - strand, within DvMF_1868 at 2293.224 kb on - strand, within DvMF_1868 at 2293.292 kb on + strand, within DvMF_1868 at 2293.481 kb on - strand, within DvMF_1868 at 2293.640 kb on + strand, within DvMF_1868 at 2293.640 kb on + strand, within DvMF_1868 at 2293.648 kb on - strand, within DvMF_1868 at 2293.990 kb on + strand at 2293.997 kb on + strand at 2293.998 kb on - strand at 2294.291 kb on - strand at 2294.348 kb on + strand at 2294.788 kb on + strand, within DvMF_1869 at 2294.928 kb on + strand, within DvMF_1869 at 2295.004 kb on + strand, within DvMF_1869
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.25 mg/ml remove 2,291,130 + -0.1 2,291,138 - +0.4 2,291,149 + -0.5 2,291,369 - +0.4 2,291,369 - -3.8 2,291,537 + DvMF_1867 0.27 -2.9 2,291,544 + DvMF_1867 0.28 -3.1 2,291,563 - DvMF_1867 0.31 +0.3 2,291,950 - -0.6 2,292,084 - -3.4 2,292,213 + +0.1 2,292,221 - DvMF_1868 0.10 -0.2 2,292,221 - DvMF_1868 0.10 -0.8 2,292,338 - DvMF_1868 0.16 -0.8 2,292,386 + DvMF_1868 0.18 -0.9 2,292,736 + DvMF_1868 0.34 +1.0 2,293,011 - DvMF_1868 0.47 -0.4 2,293,224 - DvMF_1868 0.57 -0.8 2,293,292 + DvMF_1868 0.60 -2.1 2,293,481 - DvMF_1868 0.69 -0.9 2,293,640 + DvMF_1868 0.76 -0.3 2,293,640 + DvMF_1868 0.76 +0.9 2,293,648 - DvMF_1868 0.77 -3.4 2,293,990 + -2.2 2,293,997 + -0.8 2,293,998 - -0.7 2,294,291 - -0.7 2,294,348 + -0.5 2,294,788 + DvMF_1869 0.22 +1.0 2,294,928 + DvMF_1869 0.30 -0.8 2,295,004 + DvMF_1869 0.34 +0.6
Or see this region's nucleotide sequence