Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1658
Experiment: MoYLS4 with Polymyxin B sulfate 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,033,977 | - | DvMF_1657 | 0.19 | +0.5 | |
2,034,028 | + | DvMF_1657 | 0.23 | -0.4 | |
2,034,043 | - | DvMF_1657 | 0.25 | -0.2 | |
2,034,043 | - | DvMF_1657 | 0.25 | +1.2 | |
2,034,049 | - | DvMF_1657 | 0.25 | +0.2 | |
2,034,088 | + | DvMF_1657 | 0.28 | -1.3 | |
2,034,168 | + | DvMF_1657 | 0.35 | +0.0 | |
2,034,452 | - | DvMF_1657 | 0.58 | -0.2 | |
2,034,480 | - | DvMF_1657 | 0.60 | -0.1 | |
2,034,600 | + | DvMF_1657 | 0.70 | -0.8 | |
2,034,692 | + | DvMF_1657 | 0.77 | -0.9 | |
2,034,977 | - | +0.1 | |||
2,035,075 | + | -0.3 | |||
2,035,309 | + | DvMF_1658 | 0.20 | +0.1 | |
2,035,521 | + | DvMF_1658 | 0.33 | -0.4 | |
2,035,720 | - | DvMF_1658 | 0.44 | -0.4 | |
2,036,413 | + | DvMF_1658 | 0.85 | +0.2 | |
2,036,572 | - | -3.5 | |||
2,036,635 | - | -0.3 | |||
2,036,803 | + | DvMF_1659 | 0.31 | -0.4 | |
2,036,821 | + | DvMF_1659 | 0.34 | +1.2 | |
2,036,821 | + | DvMF_1659 | 0.34 | -1.5 | |
2,036,976 | - | DvMF_1659 | 0.67 | -0.0 | |
2,036,976 | - | DvMF_1659 | 0.67 | -0.7 | |
2,037,100 | - | -0.6 | |||
2,037,201 | + | -1.3 | |||
2,037,254 | - | DvMF_1660 | 0.13 | -0.4 | |
2,037,285 | - | DvMF_1660 | 0.20 | -1.5 | |
2,037,526 | - | DvMF_1660 | 0.81 | +0.2 | |
2,037,600 | - | +0.2 |
Or see this region's nucleotide sequence