Experiment: MoYLS4 with Polymyxin B sulfate 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0519 and DvMF_0520 are separated by 69 nucleotides DvMF_0520 and DvMF_0521 are separated by 3 nucleotides
DvMF_0519: DvMF_0519 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein (RefSeq), at 612,678 to 613,742
_0519
DvMF_0520: DvMF_0520 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 613,812 to 614,609
_0520
DvMF_0521: DvMF_0521 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 614,613 to 615,491
_0521
Position (kb) 613
614
615 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 612.831 kb on + strand, within DvMF_0519 at 612.901 kb on - strand, within DvMF_0519 at 612.915 kb on - strand, within DvMF_0519 at 613.047 kb on - strand, within DvMF_0519 at 613.061 kb on + strand, within DvMF_0519 at 613.137 kb on - strand, within DvMF_0519 at 613.234 kb on - strand, within DvMF_0519 at 613.440 kb on - strand, within DvMF_0519 at 613.529 kb on + strand, within DvMF_0519 at 613.608 kb on + strand, within DvMF_0519 at 613.615 kb on - strand, within DvMF_0519 at 613.616 kb on - strand, within DvMF_0519 at 613.658 kb on + strand at 613.732 kb on - strand at 613.924 kb on - strand, within DvMF_0520 at 614.460 kb on + strand, within DvMF_0520 at 614.525 kb on + strand, within DvMF_0520 at 614.673 kb on - strand at 614.704 kb on + strand, within DvMF_0521 at 614.720 kb on + strand, within DvMF_0521 at 614.811 kb on + strand, within DvMF_0521 at 614.966 kb on + strand, within DvMF_0521 at 615.085 kb on + strand, within DvMF_0521 at 615.293 kb on - strand, within DvMF_0521 at 615.336 kb on + strand, within DvMF_0521 at 615.355 kb on + strand, within DvMF_0521
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.25 mg/ml remove 612,831 + DvMF_0519 0.14 -1.7 612,901 - DvMF_0519 0.21 +0.6 612,915 - DvMF_0519 0.22 +0.3 613,047 - DvMF_0519 0.35 +0.4 613,061 + DvMF_0519 0.36 -0.6 613,137 - DvMF_0519 0.43 -1.8 613,234 - DvMF_0519 0.52 -0.8 613,440 - DvMF_0519 0.72 -0.8 613,529 + DvMF_0519 0.80 -0.4 613,608 + DvMF_0519 0.87 -0.9 613,615 - DvMF_0519 0.88 +0.2 613,616 - DvMF_0519 0.88 -0.3 613,658 + -0.6 613,732 - -0.3 613,924 - DvMF_0520 0.14 -0.1 614,460 + DvMF_0520 0.81 -0.7 614,525 + DvMF_0520 0.89 -1.9 614,673 - -1.3 614,704 + DvMF_0521 0.10 +0.2 614,720 + DvMF_0521 0.12 -0.9 614,811 + DvMF_0521 0.23 -4.1 614,966 + DvMF_0521 0.40 -0.4 615,085 + DvMF_0521 0.54 -0.5 615,293 - DvMF_0521 0.77 -0.3 615,336 + DvMF_0521 0.82 -1.0 615,355 + DvMF_0521 0.84 -0.8
Or see this region's nucleotide sequence