Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02960

Experiment: PYE pH6 copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE pH6 copy A
3,116,106	+				-0.5
3,116,106	+				+1.4
3,116,115	-				+0.0
3,116,146	+				-1.3
3,116,187	+				+2.0
3,116,247	+		CCNA_02959	0.15	+0.5
3,116,307	-		CCNA_02959	0.22	+1.5
3,116,307	-		CCNA_02959	0.22	+2.1
3,116,333	-		CCNA_02959	0.25	+2.4
3,116,400	+		CCNA_02959	0.33	-0.4
3,116,439	-		CCNA_02959	0.38	+1.8
3,116,464	+		CCNA_02959	0.40	+1.4
3,116,464	+		CCNA_02959	0.40	-0.8
3,116,522	-		CCNA_02959	0.47	+1.7
3,116,591	+		CCNA_02959	0.55	-0.2
3,116,601	+		CCNA_02959	0.56	-1.6
3,116,604	-		CCNA_02959	0.57	+0.6
3,116,609	-		CCNA_02959	0.57	-0.1
3,116,609	-		CCNA_02959	0.57	-0.8
3,116,661	+		CCNA_02959	0.63	+1.3
3,116,661	+		CCNA_02959	0.63	+0.1
3,116,669	-		CCNA_02959	0.64	-2.1
3,116,680	+		CCNA_02959	0.66	+0.4
3,116,680	+		CCNA_02959	0.66	+0.2
3,116,688	-		CCNA_02959	0.66	+0.1
3,116,688	-		CCNA_02959	0.66	-0.6
3,116,688	-		CCNA_02959	0.66	+0.7
3,116,688	-		CCNA_02959	0.66	+0.2
3,116,776	+		CCNA_02959	0.77	+0.9
3,116,799	-		CCNA_02959	0.79	+0.8
3,116,799	-		CCNA_02959	0.79	+0.2
3,116,812	+		CCNA_02959	0.81	-0.5
3,116,815	-		CCNA_02959	0.81	-1.0
3,116,823	+		CCNA_02959	0.82	-0.6
3,116,836	+		CCNA_02959	0.84	-0.3
3,116,841	+		CCNA_02959	0.84	-0.7
3,116,844	-		CCNA_02959	0.85	+0.3
3,116,869	+		CCNA_02959	0.87	+0.6
3,116,870	+		CCNA_02959	0.88	-1.2
3,116,872	-		CCNA_02959	0.88	+1.1
3,116,878	-		CCNA_02959	0.89	-1.1
3,116,956	+				+0.5
3,116,971	+				-0.9
3,116,971	+				+1.2
3,116,971	+				+0.7
3,116,978	-				+1.9
3,116,979	-				-1.9
3,116,979	-				+0.3
3,116,979	-				-1.8
3,116,979	-				+0.7
3,116,984	-				-0.4
3,116,987	+				+1.1
3,117,023	+				-0.3
3,117,046	-				+0.5
3,117,095	+		CCNA_02960	0.16	+0.4
3,117,125	+		CCNA_02960	0.26	+2.2
3,117,160	+		CCNA_02960	0.37	+0.3
3,117,257	+		CCNA_02960	0.68	+0.4
3,117,265	+		CCNA_02960	0.70	+0.1
3,117,273	-		CCNA_02960	0.73	+1.5
3,117,337	+				-0.7
3,117,338	+				+1.7
3,117,344	-				-0.3
3,117,353	+				-2.0
3,117,503	-				+1.3
3,117,538	-				+1.2
3,117,549	+				-1.1
3,117,576	+				+0.7
3,117,576	+				+1.1
3,117,577	+				+1.1
3,117,589	+				+0.1
3,117,597	-				+2.2
3,117,597	-				+1.5
3,117,599	+				+1.7
3,117,607	-				+1.4
3,117,607	-				+0.8
3,117,607	-				+0.6
3,117,607	-				+1.2
3,117,641	+				+1.2
3,117,641	+				+1.0
3,117,656	-				+1.1
3,117,710	+		CCNA_02961	0.12	-0.7
3,117,718	-		CCNA_02961	0.13	+1.5
3,117,743	+		CCNA_02961	0.15	+0.4
3,117,751	-		CCNA_02961	0.16	+0.9
3,117,751	-		CCNA_02961	0.16	+1.0
3,117,764	+		CCNA_02961	0.17	+0.3
3,117,788	-		CCNA_02961	0.19	+0.4
3,117,793	-		CCNA_02961	0.20	+0.3
3,117,793	-		CCNA_02961	0.20	+1.4
3,117,809	+		CCNA_02961	0.21	+0.1
3,117,809	+		CCNA_02961	0.21	+1.0
3,117,817	-		CCNA_02961	0.22	+2.2
3,117,819	+		CCNA_02961	0.22	+1.7
3,117,827	-		CCNA_02961	0.23	+1.1
3,117,849	+		CCNA_02961	0.25	-0.1
3,117,849	+		CCNA_02961	0.25	+1.4
3,117,849	+		CCNA_02961	0.25	-0.5
3,117,849	+		CCNA_02961	0.25	+0.6
3,117,857	-		CCNA_02961	0.26	+1.0
3,117,857	-		CCNA_02961	0.26	+1.0
3,117,857	-		CCNA_02961	0.26	+1.0
3,117,865	+		CCNA_02961	0.27	+0.0
3,117,896	-		CCNA_02961	0.29	+1.2
3,117,902	-		CCNA_02961	0.30	+0.9
3,117,905	+		CCNA_02961	0.30	-2.3
3,117,912	+		CCNA_02961	0.31	-0.1
3,117,913	-		CCNA_02961	0.31	+1.3
3,117,951	-		CCNA_02961	0.35	+0.4
3,118,022	+		CCNA_02961	0.41	+0.4
3,118,025	-		CCNA_02961	0.41	+1.2
3,118,030	-		CCNA_02961	0.42	+1.7
3,118,030	-		CCNA_02961	0.42	+1.1
3,118,032	+		CCNA_02961	0.42	-1.5
3,118,032	+		CCNA_02961	0.42	+1.1
3,118,040	-		CCNA_02961	0.43	+1.5
3,118,067	+		CCNA_02961	0.45	+0.2
3,118,079	+		CCNA_02961	0.46	+0.2
3,118,087	-		CCNA_02961	0.47	+1.2
3,118,109	+		CCNA_02961	0.49	+1.5
3,118,109	+		CCNA_02961	0.49	-0.9
3,118,116	+		CCNA_02961	0.50	+1.1
3,118,117	-		CCNA_02961	0.50	+1.5
3,118,121	+		CCNA_02961	0.50	+0.0
3,118,121	+		CCNA_02961	0.50	+1.0
3,118,121	+		CCNA_02961	0.50	+1.1
3,118,121	+		CCNA_02961	0.50	-0.8
3,118,122	-		CCNA_02961	0.51	+1.9
3,118,129	-		CCNA_02961	0.51	+1.4
3,118,129	-		CCNA_02961	0.51	+1.1
3,118,184	-		CCNA_02961	0.56	+2.0
3,118,205	-		CCNA_02961	0.58	+0.2
3,118,222	-		CCNA_02961	0.60	+0.1
3,118,270	+		CCNA_02961	0.64	+0.5
3,118,278	-		CCNA_02961	0.65	+1.7
3,118,294	+		CCNA_02961	0.67	-0.2
3,118,298	+		CCNA_02961	0.67	-1.1
3,118,352	+		CCNA_02961	0.72	-2.2