Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32380 and AZOBR_RS32385 are separated by 147 nucleotides AZOBR_RS32385 and AZOBR_RS32390 overlap by 4 nucleotides
AZOBR_RS32380: AZOBR_RS32380 - hypothetical protein, at 630,358 to 632,478
_RS32380
AZOBR_RS32385: AZOBR_RS32385 - FAD-dependent oxidoreductase, at 632,626 to 633,930
_RS32385
AZOBR_RS32390: AZOBR_RS32390 - amidohydrolase, at 633,927 to 635,126
_RS32390
Position (kb) 632
633
634 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 632.072 kb on + strand, within AZOBR_RS32380 at 632.400 kb on - strand at 632.585 kb on - strand at 632.663 kb on + strand at 632.664 kb on - strand at 632.664 kb on - strand at 632.664 kb on - strand at 632.814 kb on - strand, within AZOBR_RS32385 at 632.814 kb on - strand, within AZOBR_RS32385 at 633.188 kb on + strand, within AZOBR_RS32385 at 633.189 kb on - strand, within AZOBR_RS32385 at 633.405 kb on + strand, within AZOBR_RS32385 at 633.977 kb on - strand at 634.016 kb on - strand at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.073 kb on - strand, within AZOBR_RS32390 at 634.073 kb on - strand, within AZOBR_RS32390 at 634.073 kb on - strand, within AZOBR_RS32390 at 634.235 kb on - strand, within AZOBR_RS32390 at 634.235 kb on - strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 632,072 + AZOBR_RS32380 0.81 +0.8 632,400 - +0.9 632,585 - -0.8 632,663 + -0.2 632,664 - +0.4 632,664 - +0.8 632,664 - +0.2 632,814 - AZOBR_RS32385 0.14 +0.2 632,814 - AZOBR_RS32385 0.14 +0.1 633,188 + AZOBR_RS32385 0.43 -2.9 633,189 - AZOBR_RS32385 0.43 -1.2 633,405 + AZOBR_RS32385 0.60 -0.5 633,977 - +0.3 634,016 - +0.3 634,072 + AZOBR_RS32390 0.12 +0.7 634,072 + AZOBR_RS32390 0.12 +0.7 634,072 + AZOBR_RS32390 0.12 -0.1 634,072 + AZOBR_RS32390 0.12 +0.6 634,072 + AZOBR_RS32390 0.12 -0.6 634,073 - AZOBR_RS32390 0.12 +0.3 634,073 - AZOBR_RS32390 0.12 -0.3 634,073 - AZOBR_RS32390 0.12 -0.7 634,235 - AZOBR_RS32390 0.26 +0.4 634,235 - AZOBR_RS32390 0.26 +0.1 634,558 + AZOBR_RS32390 0.53 +1.0 634,558 + AZOBR_RS32390 0.53 +0.1 634,558 + AZOBR_RS32390 0.53 +0.4 634,559 - AZOBR_RS32390 0.53 +1.8 634,559 - AZOBR_RS32390 0.53 +0.2 634,559 - AZOBR_RS32390 0.53 -0.4
Or see this region's nucleotide sequence