Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26085 and AO353_26090 are separated by 573 nucleotides AO353_26090 and AO353_26095 are separated by 348 nucleotides
AO353_26085: AO353_26085 - hypothetical protein, at 5,743,181 to 5,744,263
_26085
AO353_26090: AO353_26090 - hypothetical protein, at 5,744,837 to 5,745,052
_26090
AO353_26095: AO353_26095 - hypothetical protein, at 5,745,401 to 5,745,580
_26095
Position (kb)
5744
5745
5746 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5743.951 kb on + strand, within AO353_26085 at 5744.040 kb on + strand, within AO353_26085 at 5744.041 kb on - strand, within AO353_26085 at 5744.045 kb on + strand, within AO353_26085 at 5744.088 kb on + strand, within AO353_26085 at 5744.092 kb on + strand, within AO353_26085 at 5744.096 kb on + strand, within AO353_26085 at 5744.096 kb on + strand, within AO353_26085 at 5744.096 kb on + strand, within AO353_26085 at 5744.143 kb on + strand, within AO353_26085 at 5744.149 kb on + strand, within AO353_26085 at 5744.149 kb on + strand, within AO353_26085 at 5744.149 kb on + strand, within AO353_26085 at 5744.175 kb on - strand at 5744.200 kb on + strand at 5744.282 kb on - strand at 5744.366 kb on + strand at 5744.366 kb on + strand at 5744.374 kb on + strand at 5744.374 kb on + strand at 5744.382 kb on + strand at 5744.386 kb on + strand at 5744.401 kb on + strand at 5744.409 kb on - strand at 5744.409 kb on - strand at 5744.409 kb on - strand at 5744.587 kb on + strand at 5744.587 kb on + strand at 5744.588 kb on - strand at 5744.613 kb on - strand at 5744.613 kb on - strand at 5744.655 kb on + strand at 5744.656 kb on - strand at 5744.656 kb on - strand at 5744.657 kb on + strand at 5744.657 kb on + strand at 5744.658 kb on - strand at 5744.658 kb on - strand at 5744.678 kb on + strand at 5744.791 kb on - strand at 5744.809 kb on + strand at 5744.817 kb on + strand at 5744.830 kb on + strand at 5744.966 kb on - strand, within AO353_26090 at 5744.988 kb on - strand, within AO353_26090 at 5744.988 kb on - strand, within AO353_26090 at 5744.988 kb on - strand, within AO353_26090 at 5745.057 kb on - strand at 5745.077 kb on - strand at 5745.081 kb on + strand at 5745.082 kb on - strand at 5745.082 kb on - strand at 5745.194 kb on - strand at 5745.217 kb on - strand at 5745.217 kb on - strand at 5745.250 kb on + strand at 5745.250 kb on + strand at 5745.251 kb on - strand at 5745.308 kb on - strand at 5745.351 kb on + strand at 5745.360 kb on - strand at 5745.384 kb on + strand at 5745.431 kb on + strand, within AO353_26095 at 5745.571 kb on - strand at 5745.574 kb on + strand at 5745.625 kb on + strand at 5745.632 kb on + strand at 5745.645 kb on + strand at 5745.648 kb on - strand at 5745.725 kb on + strand at 5745.725 kb on + strand at 5745.725 kb on + strand at 5745.949 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,743,951 + AO353_26085 0.71 +0.2 5,744,040 + AO353_26085 0.79 -0.5 5,744,041 - AO353_26085 0.79 +0.9 5,744,045 + AO353_26085 0.80 -1.7 5,744,088 + AO353_26085 0.84 -0.5 5,744,092 + AO353_26085 0.84 +1.6 5,744,096 + AO353_26085 0.84 +0.2 5,744,096 + AO353_26085 0.84 -0.5 5,744,096 + AO353_26085 0.84 -0.2 5,744,143 + AO353_26085 0.89 -2.1 5,744,149 + AO353_26085 0.89 -0.7 5,744,149 + AO353_26085 0.89 +0.6 5,744,149 + AO353_26085 0.89 +1.8 5,744,175 - +0.3 5,744,200 + -0.4 5,744,282 - +0.0 5,744,366 + +0.3 5,744,366 + -1.4 5,744,374 + +0.6 5,744,374 + -1.1 5,744,382 + -0.7 5,744,386 + +1.1 5,744,401 + -0.2 5,744,409 - -0.3 5,744,409 - +0.4 5,744,409 - +0.1 5,744,587 + +1.2 5,744,587 + -1.6 5,744,588 - -0.3 5,744,613 - +0.9 5,744,613 - -0.6 5,744,655 + -1.4 5,744,656 - +0.4 5,744,656 - -0.6 5,744,657 + -0.7 5,744,657 + +0.0 5,744,658 - -0.1 5,744,658 - +0.9 5,744,678 + +3.5 5,744,791 - +0.2 5,744,809 + -1.0 5,744,817 + +0.9 5,744,830 + +0.9 5,744,966 - AO353_26090 0.60 -0.2 5,744,988 - AO353_26090 0.70 -1.9 5,744,988 - AO353_26090 0.70 -1.0 5,744,988 - AO353_26090 0.70 -0.9 5,745,057 - -1.0 5,745,077 - -0.2 5,745,081 + -1.3 5,745,082 - -0.4 5,745,082 - +0.9 5,745,194 - -1.1 5,745,217 - -1.4 5,745,217 - +0.2 5,745,250 + -1.1 5,745,250 + -0.7 5,745,251 - -0.6 5,745,308 - -0.1 5,745,351 + +0.6 5,745,360 - -0.3 5,745,384 + -0.1 5,745,431 + AO353_26095 0.17 +0.9 5,745,571 - -0.4 5,745,574 + -0.2 5,745,625 + +1.2 5,745,632 + -0.5 5,745,645 + +0.7 5,745,648 - +0.0 5,745,725 + -0.1 5,745,725 + -0.7 5,745,725 + -1.3 5,745,949 - +0.9
Or see this region's nucleotide sequence