Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS20695

Experiment: L-Alanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS20690 and ABZR86_RS20695 are separated by 124 nucleotidesABZR86_RS20695 and ABZR86_RS20700 overlap by 4 nucleotides ABZR86_RS20690: ABZR86_RS20690 - class I fructose-bisphosphate aldolase, at 98,818 to 99,735 _RS20690 ABZR86_RS20695: ABZR86_RS20695 - amidohydrolase family protein, at 99,860 to 101,062 _RS20695 ABZR86_RS20700: ABZR86_RS20700 - transcriptional repressor AgaR, at 101,059 to 101,865 _RS20700 Position (kb) 99 100 101 102Strain fitness (log2 ratio) -2 -1 0 1 2at 98.914 kb on + strand, within ABZR86_RS20690at 98.914 kb on + strand, within ABZR86_RS20690at 98.914 kb on + strand, within ABZR86_RS20690at 98.914 kb on + strand, within ABZR86_RS20690at 98.914 kb on + strand, within ABZR86_RS20690at 98.915 kb on - strand, within ABZR86_RS20690at 98.915 kb on - strand, within ABZR86_RS20690at 98.915 kb on - strand, within ABZR86_RS20690at 98.915 kb on - strand, within ABZR86_RS20690at 98.915 kb on - strand, within ABZR86_RS20690at 98.915 kb on - strand, within ABZR86_RS20690at 99.022 kb on + strand, within ABZR86_RS20690at 99.022 kb on + strand, within ABZR86_RS20690at 99.023 kb on - strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.091 kb on + strand, within ABZR86_RS20690at 99.092 kb on - strand, within ABZR86_RS20690at 99.092 kb on - strand, within ABZR86_RS20690at 99.092 kb on - strand, within ABZR86_RS20690at 99.092 kb on - strand, within ABZR86_RS20690at 99.232 kb on + strand, within ABZR86_RS20690at 99.241 kb on + strand, within ABZR86_RS20690at 99.241 kb on + strand, within ABZR86_RS20690at 99.241 kb on + strand, within ABZR86_RS20690at 99.242 kb on - strand, within ABZR86_RS20690at 99.242 kb on - strand, within ABZR86_RS20690at 99.242 kb on - strand, within ABZR86_RS20690at 99.242 kb on - strand, within ABZR86_RS20690at 99.397 kb on + strand, within ABZR86_RS20690at 99.616 kb on + strand, within ABZR86_RS20690at 99.617 kb on - strand, within ABZR86_RS20690at 99.617 kb on - strand, within ABZR86_RS20690at 99.617 kb on - strand, within ABZR86_RS20690at 99.617 kb on - strand, within ABZR86_RS20690at 99.724 kb on + strandat 99.725 kb on - strandat 99.749 kb on - strandat 99.749 kb on - strandat 100.580 kb on + strand, within ABZR86_RS20695at 100.580 kb on + strand, within ABZR86_RS20695at 100.895 kb on + strand, within ABZR86_RS20695at 100.904 kb on + strand, within ABZR86_RS20695at 100.905 kb on - strand, within ABZR86_RS20695at 100.907 kb on + strand, within ABZR86_RS20695at 100.934 kb on + strand, within ABZR86_RS20695at 100.985 kb on + strandat 100.985 kb on + strandat 100.986 kb on - strandat 101.022 kb on + strandat 101.022 kb on + strandat 101.022 kb on + strandat 101.022 kb on + strandat 101.023 kb on - strandat 101.024 kb on + strandat 101.025 kb on - strandat 101.025 kb on - strandat 101.050 kb on - strandat 101.050 kb on - strandat 101.131 kb on + strandat 101.132 kb on - strandat 101.464 kb on - strand, within ABZR86_RS20700at 101.900 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (C)
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98,914 + ABZR86_RS20690 0.10 +1.5
98,914 + ABZR86_RS20690 0.10 -1.7
98,914 + ABZR86_RS20690 0.10 +1.0
98,914 + ABZR86_RS20690 0.10 +0.2
98,914 + ABZR86_RS20690 0.10 -0.2
98,915 - ABZR86_RS20690 0.11 +0.2
98,915 - ABZR86_RS20690 0.11 -0.2
98,915 - ABZR86_RS20690 0.11 +1.8
98,915 - ABZR86_RS20690 0.11 +0.4
98,915 - ABZR86_RS20690 0.11 +0.1
98,915 - ABZR86_RS20690 0.11 +0.4
99,022 + ABZR86_RS20690 0.22 +0.7
99,022 + ABZR86_RS20690 0.22 +0.4
99,023 - ABZR86_RS20690 0.22 -0.3
99,091 + ABZR86_RS20690 0.30 +0.5
99,091 + ABZR86_RS20690 0.30 -0.9
99,091 + ABZR86_RS20690 0.30 +0.9
99,091 + ABZR86_RS20690 0.30 -0.4
99,091 + ABZR86_RS20690 0.30 +0.4
99,091 + ABZR86_RS20690 0.30 +0.3
99,091 + ABZR86_RS20690 0.30 +0.5
99,091 + ABZR86_RS20690 0.30 -0.6
99,092 - ABZR86_RS20690 0.30 +0.1
99,092 - ABZR86_RS20690 0.30 -0.1
99,092 - ABZR86_RS20690 0.30 -0.2
99,092 - ABZR86_RS20690 0.30 +2.0
99,232 + ABZR86_RS20690 0.45 +0.1
99,241 + ABZR86_RS20690 0.46 +0.3
99,241 + ABZR86_RS20690 0.46 +0.4
99,241 + ABZR86_RS20690 0.46 +1.0
99,242 - ABZR86_RS20690 0.46 -0.2
99,242 - ABZR86_RS20690 0.46 +0.2
99,242 - ABZR86_RS20690 0.46 -0.4
99,242 - ABZR86_RS20690 0.46 +0.5
99,397 + ABZR86_RS20690 0.63 +1.7
99,616 + ABZR86_RS20690 0.87 +0.0
99,617 - ABZR86_RS20690 0.87 +0.2
99,617 - ABZR86_RS20690 0.87 -0.5
99,617 - ABZR86_RS20690 0.87 +0.5
99,617 - ABZR86_RS20690 0.87 -0.8
99,724 + +0.5
99,725 - +0.3
99,749 - -0.9
99,749 - +0.1
100,580 + ABZR86_RS20695 0.60 +0.1
100,580 + ABZR86_RS20695 0.60 +0.4
100,895 + ABZR86_RS20695 0.86 -0.2
100,904 + ABZR86_RS20695 0.87 +0.6
100,905 - ABZR86_RS20695 0.87 -0.2
100,907 + ABZR86_RS20695 0.87 +0.6
100,934 + ABZR86_RS20695 0.89 -0.6
100,985 + -1.9
100,985 + +0.7
100,986 - +0.1
101,022 + +0.7
101,022 + +0.3
101,022 + +0.4
101,022 + +1.4
101,023 - -0.2
101,024 + -0.1
101,025 - +0.9
101,025 - +0.0
101,050 - -0.2
101,050 - +0.0
101,131 + -0.4
101,132 - -0.3
101,464 - ABZR86_RS20700 0.50 -0.0
101,900 + -0.4

Or see this region's nucleotide sequence