Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16410

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,705,722	+		ABZR86_RS16400	0.71	+0.5
3,705,722	+		ABZR86_RS16400	0.71	-0.1
3,705,722	+		ABZR86_RS16400	0.71	+0.2
3,705,722	+		ABZR86_RS16400	0.71	+0.1
3,705,722	+		ABZR86_RS16400	0.71	+0.7
3,705,722	+		ABZR86_RS16400	0.71	-0.7
3,705,723	-		ABZR86_RS16400	0.72	+0.0
3,705,723	-		ABZR86_RS16400	0.72	+0.5
3,705,723	-		ABZR86_RS16400	0.72	-0.5
3,705,723	-		ABZR86_RS16400	0.72	-0.4
3,705,723	-		ABZR86_RS16400	0.72	-0.1
3,705,723	-		ABZR86_RS16400	0.72	+0.1
3,705,723	-		ABZR86_RS16400	0.72	+0.3
3,705,723	-		ABZR86_RS16400	0.72	-0.1
3,705,723	-		ABZR86_RS16400	0.72	+0.1
3,705,723	-		ABZR86_RS16400	0.72	-0.5
3,705,911	+				+1.2
3,705,911	+				+0.1
3,705,912	-				+0.1
3,705,912	-				-0.3
3,705,936	-				-0.5
3,706,079	+		ABZR86_RS16405	0.19	-1.5
3,706,079	+		ABZR86_RS16405	0.19	-0.2
3,706,080	-		ABZR86_RS16405	0.19	-1.2
3,706,080	-		ABZR86_RS16405	0.19	-0.2
3,706,140	-		ABZR86_RS16405	0.27	-0.7
3,706,140	-		ABZR86_RS16405	0.27	-0.3
3,706,157	+		ABZR86_RS16405	0.29	-0.6
3,706,170	+		ABZR86_RS16405	0.30	-0.0
3,706,217	+		ABZR86_RS16405	0.36	-0.2
3,706,217	+		ABZR86_RS16405	0.36	-1.8
3,706,217	+		ABZR86_RS16405	0.36	-1.7
3,706,218	-		ABZR86_RS16405	0.37	-0.4
3,706,218	-		ABZR86_RS16405	0.37	-0.7
3,706,281	+		ABZR86_RS16405	0.45	-0.7
3,706,281	+		ABZR86_RS16405	0.45	-0.4
3,706,379	+		ABZR86_RS16405	0.57	-0.3
3,706,380	-		ABZR86_RS16405	0.57	-0.4
3,706,478	+		ABZR86_RS16405	0.70	+0.0
3,706,478	+		ABZR86_RS16405	0.70	+0.6
3,706,479	-		ABZR86_RS16405	0.70	-0.5
3,706,479	-		ABZR86_RS16405	0.70	+0.3
3,706,523	+		ABZR86_RS16405	0.76	-1.4
3,706,523	+		ABZR86_RS16405	0.76	+0.8
3,706,523	+		ABZR86_RS16405	0.76	-0.8
3,706,523	+		ABZR86_RS16405	0.76	+0.1
3,706,523	+		ABZR86_RS16405	0.76	-0.5
3,706,523	+		ABZR86_RS16405	0.76	-0.2
3,706,523	+		ABZR86_RS16405	0.76	+0.1
3,706,524	-		ABZR86_RS16405	0.76	-0.2
3,706,524	-		ABZR86_RS16405	0.76	-1.0
3,706,524	-		ABZR86_RS16405	0.76	-0.1
3,706,524	-		ABZR86_RS16405	0.76	+0.6
3,706,524	-		ABZR86_RS16405	0.76	+0.1
3,706,524	-		ABZR86_RS16405	0.76	-0.1
3,706,532	+		ABZR86_RS16405	0.77	-0.0
3,706,532	+		ABZR86_RS16405	0.77	-0.5
3,706,532	+		ABZR86_RS16405	0.77	-1.0
3,706,532	+		ABZR86_RS16405	0.77	-0.7
3,706,533	-		ABZR86_RS16405	0.77	+0.3
3,706,595	+		ABZR86_RS16405	0.85	-0.4
3,706,595	+		ABZR86_RS16405	0.85	+0.2
3,706,595	+		ABZR86_RS16405	0.85	+0.1
3,706,596	-		ABZR86_RS16405	0.85	-1.0
3,706,596	-		ABZR86_RS16405	0.85	-0.7
3,707,071	+		ABZR86_RS16410	0.38	-0.2
3,707,072	-		ABZR86_RS16410	0.38	-0.7
3,707,072	-		ABZR86_RS16410	0.38	+0.1
3,707,297	-		ABZR86_RS16410	0.61	-0.2
3,707,297	-		ABZR86_RS16410	0.61	-0.3
3,707,339	-		ABZR86_RS16410	0.65	+0.4
3,707,614	+				-0.4
3,707,614	+				+0.9
3,707,614	+				-1.1
3,707,615	-				-0.2
3,707,615	-				-0.2
3,707,615	-				-2.1
3,707,702	+				-0.2
3,707,702	+				+0.0
3,707,702	+				-0.3
3,707,703	-				-0.0
3,707,703	-				-0.7
3,707,703	-				+0.8
3,707,703	-				-0.0
3,707,703	-				-0.4
3,707,705	+				-0.4
3,707,705	+				+0.2
3,707,705	+				-1.3
3,707,705	+				+0.1
3,707,706	-				+0.5
3,707,706	-				+0.3
3,707,706	-				+0.3
3,707,706	-				+0.4
3,707,707	+				-0.3
3,707,707	+				-1.0
3,707,708	-				-1.2
3,707,802	+				+0.8
3,707,802	+				+0.1
3,707,802	+				-0.1
3,707,802	+				-0.7
3,707,802	+				-1.0
3,707,802	+				+0.3
3,707,802	+				+0.0
3,707,802	+				+0.3
3,707,802	+				+0.4
3,707,802	+				+0.8
3,707,802	+				+0.3
3,707,803	-				-0.1
3,707,803	-				-0.7
3,707,803	-				-0.4
3,707,803	-				-0.2
3,707,803	-				-0.6
3,707,803	-				-0.3
3,707,803	-				-0.0
3,707,803	-				-0.7
3,707,803	-				+0.6
3,707,803	-				+0.6
3,707,803	-				+0.6
3,707,803	-				+0.2
3,707,803	-				-0.7
3,707,803	-				+0.9
3,707,901	+		ABZR86_RS16415	0.18	+0.2
3,707,931	+		ABZR86_RS16415	0.22	+0.0
3,707,931	+		ABZR86_RS16415	0.22	+0.1
3,707,931	+		ABZR86_RS16415	0.22	-0.3
3,707,931	+		ABZR86_RS16415	0.22	+0.9
3,707,932	-		ABZR86_RS16415	0.22	+0.7
3,707,994	+		ABZR86_RS16415	0.31	+0.5
3,707,994	+		ABZR86_RS16415	0.31	+0.1
3,707,995	-		ABZR86_RS16415	0.31	+1.7
3,707,995	-		ABZR86_RS16415	0.31	+0.7
3,707,995	-		ABZR86_RS16415	0.31	+0.6
3,707,995	-		ABZR86_RS16415	0.31	+0.7
3,707,995	-		ABZR86_RS16415	0.31	+0.6
3,708,069	+		ABZR86_RS16415	0.41	+0.2
3,708,070	-		ABZR86_RS16415	0.41	+0.4
3,708,070	-		ABZR86_RS16415	0.41	+1.4
3,708,111	+		ABZR86_RS16415	0.46	+0.7
3,708,213	+		ABZR86_RS16415	0.60	+0.7
3,708,214	-		ABZR86_RS16415	0.60	+0.3
3,708,243	+		ABZR86_RS16415	0.64	+1.0
3,708,243	+		ABZR86_RS16415	0.64	+0.5
3,708,244	-		ABZR86_RS16415	0.64	+0.1
3,708,244	-		ABZR86_RS16415	0.64	-0.4
3,708,244	-		ABZR86_RS16415	0.64	+0.6
3,708,244	-		ABZR86_RS16415	0.64	+0.4
3,708,355	+		ABZR86_RS16415	0.79	-0.1
3,708,355	+		ABZR86_RS16415	0.79	+0.3
3,708,355	+		ABZR86_RS16415	0.79	+0.2
3,708,355	+		ABZR86_RS16415	0.79	-0.1
3,708,355	+		ABZR86_RS16415	0.79	-0.1
3,708,355	+		ABZR86_RS16415	0.79	+0.7
3,708,355	+		ABZR86_RS16415	0.79	+2.3
3,708,355	+		ABZR86_RS16415	0.79	+3.3
3,708,355	+		ABZR86_RS16415	0.79	+0.3
3,708,355	+		ABZR86_RS16415	0.79	+0.3
3,708,355	+		ABZR86_RS16415	0.79	+0.1
3,708,355	+		ABZR86_RS16415	0.79	-0.3
3,708,356	-		ABZR86_RS16415	0.79	+0.3
3,708,356	-		ABZR86_RS16415	0.79	+0.8
3,708,356	-		ABZR86_RS16415	0.79	-0.0
3,708,356	-		ABZR86_RS16415	0.79	+0.8
3,708,356	-		ABZR86_RS16415	0.79	-1.3
3,708,356	-		ABZR86_RS16415	0.79	+0.8
3,708,356	-		ABZR86_RS16415	0.79	+0.7
3,708,405	+		ABZR86_RS16415	0.86	+0.6
3,708,406	-		ABZR86_RS16415	0.86	-0.3
3,708,406	-		ABZR86_RS16415	0.86	+0.6
3,708,459	+				-0.6
3,708,459	+				+0.2
3,708,459	+				+0.8
3,708,495	+				+0.9
3,708,495	+				+0.2
3,708,495	+				+0.8
3,708,495	+				+0.8
3,708,495	+				+0.0
3,708,495	+				+0.3
3,708,495	+				+0.6
3,708,495	+				+0.1
3,708,495	+				-0.5
3,708,495	+				+0.1
3,708,495	+				-0.5
3,708,496	-				+0.0
3,708,496	-				-0.0
3,708,496	-				+0.7
3,708,496	-				+1.1
3,708,496	-				+0.2
3,708,496	-				+0.3