Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02595 and ABZR86_RS02600 are separated by 54 nucleotides ABZR86_RS02600 and ABZR86_RS02605 are separated by 9 nucleotides ABZR86_RS02605 and ABZR86_RS02610 overlap by 4 nucleotides ABZR86_RS02610 and ABZR86_RS02615 overlap by 8 nucleotides
ABZR86_RS02595: ABZR86_RS02595 - phage major capsid protein, at 526,731 to 527,969
_RS02595
ABZR86_RS02600: ABZR86_RS02600 - hypothetical protein, at 528,024 to 528,194
_RS02600
ABZR86_RS02605: ABZR86_RS02605 - head-tail connector protein, at 528,204 to 528,689
_RS02605
ABZR86_RS02610: ABZR86_RS02610 - head-tail adaptor protein, at 528,686 to 529,051
_RS02610
ABZR86_RS02615: ABZR86_RS02615 - HK97 gp10 family phage protein, at 529,044 to 529,571
_RS02615
Position (kb) 528
529 Strain fitness (log2 ratio) -2
-1
0
1
2 at 527.116 kb on - strand, within ABZR86_RS02595 at 527.230 kb on - strand, within ABZR86_RS02595 at 527.334 kb on + strand, within ABZR86_RS02595 at 527.335 kb on - strand, within ABZR86_RS02595 at 527.335 kb on - strand, within ABZR86_RS02595 at 527.335 kb on - strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.445 kb on + strand, within ABZR86_RS02595 at 527.446 kb on - strand, within ABZR86_RS02595 at 527.446 kb on - strand, within ABZR86_RS02595 at 527.490 kb on + strand, within ABZR86_RS02595 at 527.490 kb on + strand, within ABZR86_RS02595 at 527.491 kb on - strand, within ABZR86_RS02595 at 527.598 kb on + strand, within ABZR86_RS02595 at 527.598 kb on + strand, within ABZR86_RS02595 at 527.599 kb on - strand, within ABZR86_RS02595 at 527.599 kb on - strand, within ABZR86_RS02595 at 527.599 kb on - strand, within ABZR86_RS02595 at 527.768 kb on + strand, within ABZR86_RS02595 at 527.769 kb on - strand, within ABZR86_RS02595 at 527.826 kb on + strand, within ABZR86_RS02595 at 527.826 kb on + strand, within ABZR86_RS02595 at 527.827 kb on - strand, within ABZR86_RS02595 at 527.827 kb on - strand, within ABZR86_RS02595 at 527.898 kb on + strand at 527.898 kb on + strand at 527.899 kb on - strand at 527.901 kb on - strand at 527.901 kb on - strand at 527.967 kb on + strand at 527.967 kb on + strand at 527.968 kb on - strand at 527.984 kb on + strand at 528.068 kb on + strand, within ABZR86_RS02600 at 528.069 kb on - strand, within ABZR86_RS02600 at 528.170 kb on + strand, within ABZR86_RS02600 at 528.171 kb on - strand, within ABZR86_RS02600 at 528.171 kb on - strand, within ABZR86_RS02600 at 528.188 kb on + strand at 528.189 kb on - strand at 528.189 kb on - strand at 528.192 kb on + strand at 528.193 kb on - strand at 528.315 kb on + strand, within ABZR86_RS02605 at 528.316 kb on - strand, within ABZR86_RS02605 at 528.331 kb on + strand, within ABZR86_RS02605 at 528.405 kb on + strand, within ABZR86_RS02605 at 528.405 kb on + strand, within ABZR86_RS02605 at 528.406 kb on - strand, within ABZR86_RS02605 at 528.571 kb on + strand, within ABZR86_RS02605 at 528.571 kb on + strand, within ABZR86_RS02605 at 528.571 kb on + strand, within ABZR86_RS02605 at 528.652 kb on - strand at 528.727 kb on - strand, within ABZR86_RS02610 at 528.727 kb on - strand, within ABZR86_RS02610 at 528.730 kb on + strand, within ABZR86_RS02610 at 528.731 kb on - strand, within ABZR86_RS02610 at 528.769 kb on + strand, within ABZR86_RS02610 at 528.783 kb on + strand, within ABZR86_RS02610 at 528.796 kb on - strand, within ABZR86_RS02610 at 528.876 kb on - strand, within ABZR86_RS02610 at 528.876 kb on - strand, within ABZR86_RS02610 at 528.979 kb on - strand, within ABZR86_RS02610 at 529.166 kb on - strand, within ABZR86_RS02615 at 529.166 kb on - strand, within ABZR86_RS02615
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 527,116 - ABZR86_RS02595 0.31 -0.3 527,230 - ABZR86_RS02595 0.40 +0.4 527,334 + ABZR86_RS02595 0.49 +1.8 527,335 - ABZR86_RS02595 0.49 +0.3 527,335 - ABZR86_RS02595 0.49 -0.1 527,335 - ABZR86_RS02595 0.49 +0.5 527,445 + ABZR86_RS02595 0.58 +0.8 527,445 + ABZR86_RS02595 0.58 +0.2 527,445 + ABZR86_RS02595 0.58 +1.9 527,445 + ABZR86_RS02595 0.58 +0.4 527,445 + ABZR86_RS02595 0.58 +0.0 527,445 + ABZR86_RS02595 0.58 +0.4 527,445 + ABZR86_RS02595 0.58 +0.8 527,445 + ABZR86_RS02595 0.58 -0.2 527,445 + ABZR86_RS02595 0.58 -0.2 527,445 + ABZR86_RS02595 0.58 +0.1 527,446 - ABZR86_RS02595 0.58 -0.2 527,446 - ABZR86_RS02595 0.58 +0.5 527,490 + ABZR86_RS02595 0.61 +0.6 527,490 + ABZR86_RS02595 0.61 -0.0 527,491 - ABZR86_RS02595 0.61 +0.5 527,598 + ABZR86_RS02595 0.70 +0.7 527,598 + ABZR86_RS02595 0.70 -0.5 527,599 - ABZR86_RS02595 0.70 -0.8 527,599 - ABZR86_RS02595 0.70 -0.2 527,599 - ABZR86_RS02595 0.70 -0.4 527,768 + ABZR86_RS02595 0.84 +0.2 527,769 - ABZR86_RS02595 0.84 +0.8 527,826 + ABZR86_RS02595 0.88 -0.3 527,826 + ABZR86_RS02595 0.88 +1.3 527,827 - ABZR86_RS02595 0.88 +0.3 527,827 - ABZR86_RS02595 0.88 -0.7 527,898 + -0.2 527,898 + -0.5 527,899 - +1.2 527,901 - +0.4 527,901 - +0.1 527,967 + -0.4 527,967 + +1.2 527,968 - -0.2 527,984 + -0.6 528,068 + ABZR86_RS02600 0.26 -0.9 528,069 - ABZR86_RS02600 0.26 +0.7 528,170 + ABZR86_RS02600 0.85 +0.3 528,171 - ABZR86_RS02600 0.86 -1.1 528,171 - ABZR86_RS02600 0.86 -0.1 528,188 + +0.0 528,189 - -0.8 528,189 - +0.7 528,192 + -0.3 528,193 - -1.5 528,315 + ABZR86_RS02605 0.23 -1.5 528,316 - ABZR86_RS02605 0.23 -2.2 528,331 + ABZR86_RS02605 0.26 -1.0 528,405 + ABZR86_RS02605 0.41 -0.8 528,405 + ABZR86_RS02605 0.41 -0.4 528,406 - ABZR86_RS02605 0.42 -0.3 528,571 + ABZR86_RS02605 0.76 +0.6 528,571 + ABZR86_RS02605 0.76 +0.2 528,571 + ABZR86_RS02605 0.76 +0.2 528,652 - -0.3 528,727 - ABZR86_RS02610 0.11 -0.8 528,727 - ABZR86_RS02610 0.11 -0.5 528,730 + ABZR86_RS02610 0.12 -0.1 528,731 - ABZR86_RS02610 0.12 +0.1 528,769 + ABZR86_RS02610 0.23 -0.4 528,783 + ABZR86_RS02610 0.27 +0.5 528,796 - ABZR86_RS02610 0.30 -0.1 528,876 - ABZR86_RS02610 0.52 +0.4 528,876 - ABZR86_RS02610 0.52 -0.6 528,979 - ABZR86_RS02610 0.80 +1.2 529,166 - ABZR86_RS02615 0.23 +0.8 529,166 - ABZR86_RS02615 0.23 -0.2
Or see this region's nucleotide sequence