Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005105

Experiment: Glucuronamide (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (C)
1,354,654	+		ABIE53_005104	0.24	+0.3
1,354,655	-		ABIE53_005104	0.25	+0.8
1,354,687	+		ABIE53_005104	0.28	+0.1
1,354,927	-		ABIE53_005104	0.50	-2.1
1,354,927	-		ABIE53_005104	0.50	+1.5
1,354,927	-		ABIE53_005104	0.50	-0.6
1,355,038	+		ABIE53_005104	0.60	-1.4
1,355,038	+		ABIE53_005104	0.60	+2.4
1,355,038	+		ABIE53_005104	0.60	+0.9
1,355,038	+		ABIE53_005104	0.60	+0.5
1,355,038	+		ABIE53_005104	0.60	-0.0
1,355,038	+		ABIE53_005104	0.60	+0.5
1,355,038	+		ABIE53_005104	0.60	-0.4
1,355,038	+		ABIE53_005104	0.60	+0.5
1,355,038	+		ABIE53_005104	0.60	+0.3
1,355,038	+		ABIE53_005104	0.60	-1.0
1,355,038	+		ABIE53_005104	0.60	+0.3
1,355,038	+		ABIE53_005104	0.60	+1.9
1,355,039	-		ABIE53_005104	0.60	-1.4
1,355,039	-		ABIE53_005104	0.60	-0.6
1,355,039	-		ABIE53_005104	0.60	+0.3
1,355,039	-		ABIE53_005104	0.60	-1.4
1,355,039	-		ABIE53_005104	0.60	-0.7
1,355,039	-		ABIE53_005104	0.60	+0.5
1,355,039	-		ABIE53_005104	0.60	-1.4
1,355,039	-		ABIE53_005104	0.60	-1.3
1,355,039	-		ABIE53_005104	0.60	+1.0
1,355,039	-		ABIE53_005104	0.60	-0.2
1,355,041	+		ABIE53_005104	0.61	-0.3
1,355,041	+		ABIE53_005104	0.61	-0.7
1,355,041	+		ABIE53_005104	0.61	-0.7
1,355,041	+		ABIE53_005104	0.61	-0.0
1,355,041	+		ABIE53_005104	0.61	+0.3
1,355,042	-		ABIE53_005104	0.61	+0.4
1,355,042	-		ABIE53_005104	0.61	-1.8
1,355,042	-		ABIE53_005104	0.61	-0.8
1,355,042	-		ABIE53_005104	0.61	+0.7
1,355,085	+		ABIE53_005104	0.65	+0.8
1,355,086	-		ABIE53_005104	0.65	-0.9
1,355,086	-		ABIE53_005104	0.65	+1.5
1,355,086	-		ABIE53_005104	0.65	-0.1
1,355,114	-		ABIE53_005104	0.68	+1.5
1,355,116	+		ABIE53_005104	0.68	+0.3
1,355,116	+		ABIE53_005104	0.68	+0.0
1,355,116	+		ABIE53_005104	0.68	+0.0
1,355,116	+		ABIE53_005104	0.68	+1.1
1,355,116	+		ABIE53_005104	0.68	-0.5
1,355,117	-		ABIE53_005104	0.68	+0.5
1,355,117	-		ABIE53_005104	0.68	-0.2
1,355,302	+		ABIE53_005104	0.85	+1.0
1,355,302	+		ABIE53_005104	0.85	+0.8
1,355,302	+		ABIE53_005104	0.85	+0.1
1,355,303	-		ABIE53_005104	0.85	+0.4
1,355,347	+		ABIE53_005104	0.89	-0.9
1,355,347	+		ABIE53_005104	0.89	+0.3
1,355,348	-		ABIE53_005104	0.89	-1.2
1,355,348	-		ABIE53_005104	0.89	-0.9
1,355,400	+				-0.8
1,355,518	+				-2.8
1,355,519	-				-0.6
1,355,700	+		ABIE53_005105	0.88	-1.1
1,355,700	+		ABIE53_005105	0.88	-0.7
1,355,700	+		ABIE53_005105	0.88	-1.2
1,355,700	+		ABIE53_005105	0.88	-0.8
1,355,700	+		ABIE53_005105	0.88	-1.3
1,355,700	+		ABIE53_005105	0.88	-0.4
1,355,700	+		ABIE53_005105	0.88	+0.8
1,355,701	-		ABIE53_005105	0.88	-2.2
1,355,701	-		ABIE53_005105	0.88	+0.6
1,355,701	-		ABIE53_005105	0.88	-0.8
1,355,701	-		ABIE53_005105	0.88	-1.5
1,355,701	-		ABIE53_005105	0.88	-1.0
1,355,701	-		ABIE53_005105	0.88	-1.9
1,355,701	-		ABIE53_005105	0.88	+0.5
1,355,701	-		ABIE53_005105	0.88	+0.9
1,355,701	-		ABIE53_005105	0.88	-1.3
1,355,701	-		ABIE53_005105	0.88	-0.9
1,355,701	-		ABIE53_005105	0.88	-0.2
1,355,701	-		ABIE53_005105	0.88	-0.9
1,355,701	-		ABIE53_005105	0.88	-1.2
1,355,701	-		ABIE53_005105	0.88	+0.5
1,355,701	-		ABIE53_005105	0.88	-0.4
1,355,701	-		ABIE53_005105	0.88	+0.5
1,355,701	-		ABIE53_005105	0.88	-1.0
1,355,710	+				-1.0
1,355,711	+				+0.9
1,355,711	+				-0.7
1,355,711	+				-0.2
1,355,711	+				-0.7
1,355,711	+				-1.7
1,355,712	-				+0.2
1,355,712	-				-0.8
1,355,712	-				+0.8
1,355,712	-				-1.0
1,355,712	-				-0.2
1,355,852	+				-0.0
1,355,886	-				+0.8
1,355,948	+				+0.5
1,355,948	+				-1.0
1,355,948	+				-0.1
1,355,948	+				+0.6
1,355,948	+				-0.8
1,355,949	-				-0.2
1,355,985	-		ABIE53_005106	0.14	+1.6
1,355,985	-		ABIE53_005106	0.14	-1.4
1,356,222	-		ABIE53_005106	0.48	+0.5
1,356,222	-		ABIE53_005106	0.48	+0.3
1,356,222	-		ABIE53_005106	0.48	+0.4
1,356,249	+		ABIE53_005106	0.52	+0.5
1,356,263	+		ABIE53_005106	0.54	+2.5
1,356,263	+		ABIE53_005106	0.54	+0.9
1,356,263	+		ABIE53_005106	0.54	+0.1
1,356,263	+		ABIE53_005106	0.54	+1.3
1,356,264	-		ABIE53_005106	0.54	+0.5
1,356,264	-		ABIE53_005106	0.54	+0.0
1,356,264	-		ABIE53_005106	0.54	-1.2
1,356,264	-		ABIE53_005106	0.54	+0.1
1,356,317	+		ABIE53_005106	0.61	-0.2
1,356,317	+		ABIE53_005106	0.61	-1.3
1,356,317	+		ABIE53_005106	0.61	+1.2
1,356,317	+		ABIE53_005106	0.61	-0.3
1,356,456	+		ABIE53_005106	0.81	-2.0
1,356,456	+		ABIE53_005106	0.81	+1.2
1,356,456	+		ABIE53_005106	0.81	+0.4
1,356,456	+		ABIE53_005106	0.81	+2.4
1,356,456	+		ABIE53_005106	0.81	+0.9
1,356,456	+		ABIE53_005106	0.81	+0.5
1,356,456	+		ABIE53_005106	0.81	+0.0
1,356,456	+		ABIE53_005106	0.81	-0.2
1,356,456	+		ABIE53_005106	0.81	-0.2
1,356,456	+		ABIE53_005106	0.81	-0.7
1,356,456	+		ABIE53_005106	0.81	-0.1
1,356,457	-		ABIE53_005106	0.81	-0.9
1,356,457	-		ABIE53_005106	0.81	-1.5
1,356,457	-		ABIE53_005106	0.81	-2.6
1,356,457	-		ABIE53_005106	0.81	-0.0
1,356,457	-		ABIE53_005106	0.81	+0.5
1,356,478	+		ABIE53_005106	0.84	+1.8
1,356,478	+		ABIE53_005106	0.84	+1.7
1,356,478	+		ABIE53_005106	0.84	+1.9
1,356,478	+		ABIE53_005106	0.84	+1.1
1,356,479	-		ABIE53_005106	0.84	+1.5
1,356,479	-		ABIE53_005106	0.84	-0.8
1,356,634	+				+0.4
1,356,634	+				+0.9
1,356,635	-				+2.1
1,356,635	-				+1.2
1,356,635	-				+0.6
1,356,635	-				-0.8
1,356,635	-				-0.2
1,356,669	+				+0.0
1,356,670	-				+0.4
1,356,670	-				-0.9