Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0866 and DvMF_0867 are separated by 429 nucleotides DvMF_0867 and DvMF_0868 are separated by 530 nucleotides
DvMF_0866: DvMF_0866 - ammonium transporter (RefSeq), at 1,043,694 to 1,044,902
_0866
DvMF_0867: DvMF_0867 - Redoxin domain protein (RefSeq), at 1,045,332 to 1,045,844
_0867
DvMF_0868: DvMF_0868 - hypothetical protein (RefSeq), at 1,046,375 to 1,046,848
_0868
Position (kb)
1045
1046 Strain fitness (log2 ratio)
-1
0
1 at 1044.350 kb on - strand, within DvMF_0866 at 1044.397 kb on + strand, within DvMF_0866 at 1044.582 kb on - strand, within DvMF_0866 at 1044.784 kb on + strand at 1044.818 kb on - strand at 1044.828 kb on - strand at 1044.926 kb on + strand at 1044.943 kb on - strand at 1044.991 kb on - strand at 1045.274 kb on - strand at 1045.501 kb on + strand, within DvMF_0867 at 1045.558 kb on + strand, within DvMF_0867 at 1045.621 kb on - strand, within DvMF_0867 at 1045.810 kb on + strand at 1045.823 kb on - strand at 1046.022 kb on - strand at 1046.046 kb on + strand at 1046.054 kb on - strand at 1046.064 kb on - strand at 1046.064 kb on - strand at 1046.064 kb on - strand at 1046.066 kb on + strand at 1046.074 kb on - strand at 1046.074 kb on - strand at 1046.074 kb on - strand at 1046.076 kb on + strand at 1046.224 kb on + strand at 1046.273 kb on + strand at 1046.281 kb on - strand at 1046.791 kb on + strand, within DvMF_0868
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,044,350 - DvMF_0866 0.54 -0.5 1,044,397 + DvMF_0866 0.58 +0.3 1,044,582 - DvMF_0866 0.73 -0.6 1,044,784 + -0.6 1,044,818 - +0.5 1,044,828 - +0.1 1,044,926 + -0.4 1,044,943 - -0.9 1,044,991 - -0.4 1,045,274 - -0.3 1,045,501 + DvMF_0867 0.33 -0.1 1,045,558 + DvMF_0867 0.44 +0.5 1,045,621 - DvMF_0867 0.56 +0.0 1,045,810 + -0.1 1,045,823 - -0.0 1,046,022 - -0.2 1,046,046 + +0.8 1,046,054 - -0.2 1,046,064 - -0.3 1,046,064 - +0.2 1,046,064 - -0.5 1,046,066 + +0.2 1,046,074 - -0.3 1,046,074 - -0.2 1,046,074 - -0.0 1,046,076 + -0.3 1,046,224 + -0.3 1,046,273 + -0.0 1,046,281 - +1.2 1,046,791 + DvMF_0868 0.88 -0.1
Or see this region's nucleotide sequence