Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0829 and DvMF_0830 are separated by 430 nucleotides DvMF_0830 and DvMF_0831 are separated by 236 nucleotides
DvMF_0829: DvMF_0829 - alpha/beta hydrolase fold protein (RefSeq), at 1,000,881 to 1,001,873
_0829
DvMF_0830: DvMF_0830 - HI0933 family protein (RefSeq), at 1,002,304 to 1,003,563
_0830
DvMF_0831: DvMF_0831 - protein of unknown function DUF21 (RefSeq), at 1,003,800 to 1,005,158
_0831
Position (kb)
1002
1003
1004 Strain fitness (log2 ratio)
-1
0
1 at 1001.630 kb on - strand, within DvMF_0829 at 1001.636 kb on - strand, within DvMF_0829 at 1002.078 kb on - strand at 1002.285 kb on + strand at 1002.754 kb on - strand, within DvMF_0830 at 1002.913 kb on + strand, within DvMF_0830 at 1002.985 kb on + strand, within DvMF_0830 at 1002.993 kb on - strand, within DvMF_0830 at 1003.000 kb on + strand, within DvMF_0830 at 1003.113 kb on - strand, within DvMF_0830 at 1003.147 kb on + strand, within DvMF_0830 at 1003.324 kb on + strand, within DvMF_0830 at 1003.329 kb on + strand, within DvMF_0830 at 1003.362 kb on - strand, within DvMF_0830 at 1003.459 kb on + strand at 1003.477 kb on - strand at 1003.796 kb on - strand at 1003.863 kb on - strand at 1003.965 kb on + strand, within DvMF_0831 at 1003.997 kb on + strand, within DvMF_0831 at 1003.997 kb on + strand, within DvMF_0831 at 1004.005 kb on - strand, within DvMF_0831 at 1004.085 kb on + strand, within DvMF_0831 at 1004.210 kb on - strand, within DvMF_0831 at 1004.212 kb on + strand, within DvMF_0831 at 1004.212 kb on + strand, within DvMF_0831 at 1004.233 kb on + strand, within DvMF_0831 at 1004.505 kb on + strand, within DvMF_0831
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,001,630 - DvMF_0829 0.75 -0.4 1,001,636 - DvMF_0829 0.76 -0.2 1,002,078 - -0.3 1,002,285 + +0.1 1,002,754 - DvMF_0830 0.36 +0.0 1,002,913 + DvMF_0830 0.48 -0.6 1,002,985 + DvMF_0830 0.54 -0.0 1,002,993 - DvMF_0830 0.55 -0.3 1,003,000 + DvMF_0830 0.55 +0.0 1,003,113 - DvMF_0830 0.64 +0.2 1,003,147 + DvMF_0830 0.67 +0.2 1,003,324 + DvMF_0830 0.81 -0.6 1,003,329 + DvMF_0830 0.81 -0.3 1,003,362 - DvMF_0830 0.84 -0.3 1,003,459 + -0.4 1,003,477 - -0.3 1,003,796 - -0.1 1,003,863 - -0.0 1,003,965 + DvMF_0831 0.12 +0.1 1,003,997 + DvMF_0831 0.14 -0.2 1,003,997 + DvMF_0831 0.14 -0.6 1,004,005 - DvMF_0831 0.15 -0.4 1,004,085 + DvMF_0831 0.21 -0.3 1,004,210 - DvMF_0831 0.30 -0.8 1,004,212 + DvMF_0831 0.30 +0.6 1,004,212 + DvMF_0831 0.30 +0.0 1,004,233 + DvMF_0831 0.32 -0.4 1,004,505 + DvMF_0831 0.52 -0.3
Or see this region's nucleotide sequence