Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0426 and Shew_0427 overlap by 1 nucleotides Shew_0427 and Shew_0428 are separated by 230 nucleotides Shew_0428 and Shew_0429 are separated by 328 nucleotides
Shew_0426: Shew_0426 - ABC transporter-related protein (RefSeq), at 479,300 to 480,322
_0426
Shew_0427: Shew_0427 - hypothetical protein (RefSeq), at 480,322 to 481,275
_0427
Shew_0428: Shew_0428 - hypothetical protein (RefSeq), at 481,506 to 481,679
_0428
Shew_0429: Shew_0429 - hypothetical protein (RefSeq), at 482,008 to 482,700
_0429
Position (kb) 480
481
482 Strain fitness (log2 ratio) -1
0
1 at 479.469 kb on + strand, within Shew_0426 at 479.471 kb on - strand, within Shew_0426 at 480.330 kb on + strand at 480.361 kb on + strand at 480.369 kb on - strand at 480.660 kb on - strand, within Shew_0427 at 480.798 kb on - strand, within Shew_0427 at 480.861 kb on + strand, within Shew_0427 at 481.020 kb on - strand, within Shew_0427 at 481.176 kb on + strand, within Shew_0427 at 481.422 kb on - strand at 481.505 kb on - strand at 481.726 kb on + strand at 481.859 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 479,469 + Shew_0426 0.17 +0.5 479,471 - Shew_0426 0.17 +0.1 480,330 + +0.2 480,361 + +0.0 480,369 - -0.3 480,660 - Shew_0427 0.35 +0.6 480,798 - Shew_0427 0.50 +0.3 480,861 + Shew_0427 0.56 +0.8 481,020 - Shew_0427 0.73 +0.3 481,176 + Shew_0427 0.90 +0.5 481,422 - +0.3 481,505 - +0.1 481,726 + +0.9 481,859 + +0.5
Or see this region's nucleotide sequence