Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24645

Experiment: Ethanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ethanol (C)
5,421,348	+		AO353_24635	0.83	-0.9
5,421,348	+		AO353_24635	0.83	-0.0
5,421,348	+		AO353_24635	0.83	-0.1
5,421,349	-		AO353_24635	0.83	-1.4
5,421,349	-		AO353_24635	0.83	+0.2
5,421,411	-				+0.2
5,421,472	-				-0.1
5,421,477	+				-0.9
5,421,478	-				-0.4
5,421,478	-				+0.7
5,421,480	+				-0.5
5,421,480	+				+0.3
5,421,584	+				+0.1
5,421,584	+				-1.6
5,421,585	-				+0.1
5,421,587	+				-0.2
5,421,587	+				+0.4
5,421,587	+				-0.4
5,421,587	+				-0.9
5,421,587	+				+0.0
5,421,587	+				+0.4
5,421,588	-				+0.5
5,421,588	-				-0.3
5,421,617	+				-1.3
5,421,618	-				-1.6
5,421,678	-				+0.5
5,421,678	-				-0.0
5,421,678	-				+0.9
5,421,725	+				-1.9
5,421,726	-				-1.8
5,421,726	-				-1.3
5,421,726	-				+1.9
5,421,776	+				+2.0
5,421,776	+				-1.8
5,421,776	+				+0.1
5,421,777	-				+0.2
5,421,777	-				-0.6
5,421,799	+				-1.6
5,421,799	+				-0.9
5,421,799	+				+0.4
5,421,800	-				+0.4
5,421,828	+				+2.1
5,421,828	+				-0.6
5,421,828	+				-0.7
5,421,828	+				+0.4
5,421,828	+				-0.3
5,421,828	+				-0.6
5,421,829	-				+2.4
5,421,829	-				-0.4
5,421,829	-				-0.5
5,421,832	+				+1.4
5,421,832	+				-0.2
5,421,832	+				+1.0
5,421,833	-				+0.5
5,421,833	-				+0.2
5,421,899	+				-0.2
5,421,899	+				-1.4
5,421,982	+		AO353_24640	0.14	+0.0
5,421,982	+		AO353_24640	0.14	-1.4
5,421,982	+		AO353_24640	0.14	+0.8
5,421,983	-		AO353_24640	0.15	-1.4
5,421,983	-		AO353_24640	0.15	-1.2
5,421,983	-		AO353_24640	0.15	-1.5
5,421,983	-		AO353_24640	0.15	+0.6
5,421,993	+		AO353_24640	0.17	+0.6
5,422,163	+		AO353_24640	0.58	-0.3
5,422,163	+		AO353_24640	0.58	+0.5
5,422,163	+		AO353_24640	0.58	-0.7
5,422,163	+		AO353_24640	0.58	-1.2
5,422,163	+		AO353_24640	0.58	-0.1
5,422,163	+		AO353_24640	0.58	-0.2
5,422,163	+		AO353_24640	0.58	+0.1
5,422,164	-		AO353_24640	0.58	+0.4
5,422,164	-		AO353_24640	0.58	-0.0
5,422,164	-		AO353_24640	0.58	+0.2
5,422,164	-		AO353_24640	0.58	-0.0
5,422,386	+				-0.7
5,422,386	+				+1.4
5,422,386	+				+0.1
5,422,386	+				+1.1
5,422,386	+				-0.6
5,422,386	+				+0.2
5,422,387	-				+0.6
5,422,387	-				-1.2
5,422,387	-				-0.3
5,422,387	-				-0.4
5,422,387	-				-1.8
5,422,387	-				+1.0
5,422,387	-				+0.2
5,422,412	+				-0.3
5,422,412	+				+1.4
5,422,413	-				-0.4
5,422,413	-				-0.9
5,422,564	+		AO353_24645	0.12	+2.0
5,422,565	-		AO353_24645	0.12	-0.2
5,422,565	-		AO353_24645	0.12	+0.2
5,422,565	-		AO353_24645	0.12	+0.4
5,422,565	-		AO353_24645	0.12	+1.1
5,422,640	+		AO353_24645	0.16	+0.6
5,422,640	+		AO353_24645	0.16	+0.4
5,422,641	-		AO353_24645	0.16	+0.0
5,422,641	-		AO353_24645	0.16	-1.2
5,422,789	+		AO353_24645	0.24	-1.1
5,422,789	+		AO353_24645	0.24	+2.1
5,422,799	-		AO353_24645	0.25	-1.1
5,422,812	+		AO353_24645	0.25	-0.4
5,422,842	-		AO353_24645	0.27	-0.1
5,422,892	-		AO353_24645	0.30	-1.4
5,422,907	-		AO353_24645	0.30	-0.0
5,422,908	+				+0.4
5,422,909	-		AO353_24645	0.30	+0.4
5,422,909	-		AO353_24645	0.30	-1.2
5,422,909	-		AO353_24645	0.30	+0.2
5,422,952	-		AO353_24645	0.33	-0.2
5,422,954	+		AO353_24645	0.33	+0.4
5,422,955	-		AO353_24645	0.33	+0.2
5,423,064	+		AO353_24645	0.39	-1.4
5,423,064	+		AO353_24645	0.39	-1.4
5,423,064	+		AO353_24645	0.39	+0.7
5,423,064	+		AO353_24645	0.39	-0.9
5,423,064	+		AO353_24645	0.39	+0.3
5,423,065	-		AO353_24645	0.39	+0.4
5,423,065	-		AO353_24645	0.39	-2.4
5,423,065	-		AO353_24645	0.39	-0.5
5,423,065	-		AO353_24645	0.39	-1.3
5,423,278	+		AO353_24645	0.50	+1.4
5,423,278	+		AO353_24645	0.50	-1.6
5,423,279	-		AO353_24645	0.50	-1.0
5,423,279	-		AO353_24645	0.50	-1.2
5,423,281	-		AO353_24645	0.50	+0.4
5,423,306	-		AO353_24645	0.52	+0.7
5,423,308	+		AO353_24645	0.52	+0.4
5,423,309	-		AO353_24645	0.52	+0.2
5,423,309	-		AO353_24645	0.52	-0.9
5,423,396	+		AO353_24645	0.56	-1.6
5,423,396	+		AO353_24645	0.56	-0.4
5,423,397	-		AO353_24645	0.56	-0.6
5,423,442	-		AO353_24645	0.59	-0.0
5,423,442	-		AO353_24645	0.59	-0.2
5,423,442	-		AO353_24645	0.59	-0.6
5,423,493	-		AO353_24645	0.61	-0.7
5,423,531	-		AO353_24645	0.63	-0.8
5,423,605	-		AO353_24645	0.67	-1.9
5,423,605	-		AO353_24645	0.67	+0.7
5,423,605	-		AO353_24645	0.67	-1.2
5,423,607	+				-1.4
5,423,608	-		AO353_24645	0.68	-0.6
5,423,608	-		AO353_24645	0.68	+1.4
5,423,608	-		AO353_24645	0.68	-0.2
5,423,608	-				+0.8
5,423,612	+		AO353_24645	0.68	+0.4
5,423,612	+		AO353_24645	0.68	-0.2
5,423,613	-		AO353_24645	0.68	-1.6
5,423,613	-		AO353_24645	0.68	-1.9
5,423,613	-		AO353_24645	0.68	+0.1
5,423,613	-		AO353_24645	0.68	-1.5
5,423,616	+		AO353_24645	0.68	-0.3
5,423,617	-		AO353_24645	0.68	-0.2
5,423,695	+		AO353_24645	0.72	-1.8
5,423,720	-		AO353_24645	0.74	-0.6
5,423,720	-		AO353_24645	0.74	+1.2
5,423,720	-		AO353_24645	0.74	-2.4
5,423,720	-		AO353_24645	0.74	-0.3
5,423,720	-		AO353_24645	0.74	-1.1
5,423,725	+		AO353_24645	0.74	-0.3
5,423,725	+		AO353_24645	0.74	+1.0
5,423,725	+		AO353_24645	0.74	+0.4
5,423,726	-		AO353_24645	0.74	+0.2
5,423,729	+		AO353_24645	0.74	+0.6
5,423,729	+		AO353_24645	0.74	-0.6
5,423,730	-		AO353_24645	0.74	+0.1
5,423,733	+		AO353_24645	0.74	-0.9
5,423,733	+		AO353_24645	0.74	-1.2
5,423,733	+		AO353_24645	0.74	-0.2
5,423,733	+		AO353_24645	0.74	-0.8
5,423,734	-		AO353_24645	0.74	+1.6
5,423,734	-		AO353_24645	0.74	+0.4
5,423,734	-		AO353_24645	0.74	-1.9
5,423,846	+		AO353_24645	0.80	+0.4
5,423,878	-		AO353_24645	0.82	-0.2
5,423,888	-		AO353_24645	0.82	+1.1
5,423,888	-		AO353_24645	0.82	-2.1
5,424,020	+		AO353_24645	0.89	-1.8
5,424,020	+		AO353_24645	0.89	-0.6
5,424,020	+		AO353_24645	0.89	-1.2
5,424,078	+				-0.2
5,424,150	+				+0.8
5,424,151	-				+0.1
5,424,318	+				+1.4
5,424,319	-				+0.6
5,424,323	-				-0.3
5,424,400	-				-1.2
5,424,568	+		AO353_24650	0.10	+0.4
5,424,645	+		AO353_24650	0.15	+0.4
5,424,645	+		AO353_24650	0.15	+0.8
5,424,685	-		AO353_24650	0.17	+0.1
5,424,685	-		AO353_24650	0.17	-0.9
5,424,685	-		AO353_24650	0.17	-0.9
5,424,748	-		AO353_24650	0.20	+0.7
5,424,791	-		AO353_24650	0.23	-0.4
5,424,791	-		AO353_24650	0.23	-0.9
5,424,795	+		AO353_24650	0.23	+0.1
5,424,795	+		AO353_24650	0.23	+0.4
5,424,796	-		AO353_24650	0.23	-0.9
5,424,796	-		AO353_24650	0.23	-0.3
5,424,796	-		AO353_24650	0.23	-1.5
5,424,796	-		AO353_24650	0.23	-0.6
5,424,796	-		AO353_24650	0.23	+0.4
5,424,796	-		AO353_24650	0.23	-1.1
5,424,835	-		AO353_24650	0.25	-1.4
5,424,835	-		AO353_24650	0.25	-0.5
5,424,954	-				+1.4
5,425,048	-		AO353_24650	0.37	+0.9
5,425,048	-		AO353_24650	0.37	-1.5
5,425,060	-		AO353_24650	0.38	+0.7
5,425,131	+		AO353_24650	0.42	-0.2
5,425,131	+		AO353_24650	0.42	-1.3
5,425,132	-		AO353_24650	0.42	+0.4
5,425,132	-		AO353_24650	0.42	-2.1
5,425,213	-		AO353_24650	0.47	-0.4